Gene Pmen_3691 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3691 
Symbol 
ID5110152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4073834 
End bp4074652 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content58% 
IMG OID640504946 
Producthypothetical protein 
Protein accessionYP_001189171 
Protein GI146308706 
COG category[S] Function unknown 
COG ID[COG1432] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGCA AAGCCCCCAT CTCCCGCCAG CACAAACACC TTGCCGTGCT GATCGACGCC 
GACAATGCCC CTGCCGCTAT CGTCGAAGGT CTTTTCGAAG AAATCGCCAA ATACGGCGTT
GCCAGCGTCA AGCGTATCTA TGGCGACTGG ACGCAGCCCA ATCTCGGCAG CTGGAAGAAA
GTGCTGCTCG ACCACTCCAT CCAGCCGATC CAGCAGTTCG CCTATACCAA GGGCAAGAAC
GCCACCGACA GCTCGCTGAT CATCGATGCC ATGGACTTGC TTTATACCCG CCGCTTCGAC
GGCTTCTGCC TGGTTTCCAG CGACAGCGAC TTCACCCGGC TGGCGGCTCG CCTGCGCGAG
GAAGGGCTGA CCGTATACGG ATTTGGCGAA GAGAAAACGC CCTCCCCCTT CGTCTCTGCC
TGCGACAAAT TCATCTATAC AGAAATTCTT CGCGCCGGCG CGGCCGGCGC AACGGAAGAA
CTGCCTAGCA ACGGCGACAA GGCCAAACCC GCCGCTGGCG AGACCGCACC CGCCGAACCA
GCCAAAGCGC CCACCCAACC GAAGACGCAG AAGGTGCCGG TGGACTTTAT CGCCAAGATT
ATTGACGACA GCAACGAAGA GGATGGCTGG ATCCAGCTCG GCGCTCTCGG ATCTAACATC
AGCAAGTTGC GTCCCGCCTT TGACGCACGA CTGTATGGTT TCAAAAAACT CAGCGAGTTG
ATCAGAGCGA ACCCTAAGCG CTTTGAACTA CAGACTCGAG GAAGCAGCGC AACGGGAGGA
GAAGTTCTGT ACGTGAGAAA CCGTAAAGTA GAGAAATAG
 
Protein sequence
MASKAPISRQ HKHLAVLIDA DNAPAAIVEG LFEEIAKYGV ASVKRIYGDW TQPNLGSWKK 
VLLDHSIQPI QQFAYTKGKN ATDSSLIIDA MDLLYTRRFD GFCLVSSDSD FTRLAARLRE
EGLTVYGFGE EKTPSPFVSA CDKFIYTEIL RAGAAGATEE LPSNGDKAKP AAGETAPAEP
AKAPTQPKTQ KVPVDFIAKI IDDSNEEDGW IQLGALGSNI SKLRPAFDAR LYGFKKLSEL
IRANPKRFEL QTRGSSATGG EVLYVRNRKV EK