Gene Pmen_3668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3668 
Symbol 
ID5110129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4053137 
End bp4053958 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content65% 
IMG OID640504923 
Productpeptidase M48, Ste24p 
Protein accessionYP_001189148 
Protein GI146308683 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGG TTGTTAACCT GAGTGGCCTG GCCGTGGCGT TGCTGCTGGC GGGCTGCCAG 
GCGGTGAATA CCACCAGCGG TGGTGCGGTG GGCGTGGAGC GCAAGCAGTA CATGTTCAGC
ATGCTGTCGG CCGAGCAGGT CAACCAGATG TATGCGCAGT CCTATCAGCA GACGCTGAGC
GAGGCGTCGA GCAAGGGCGT TCTGGACAAG ACCAGCAATA ATGCCAAGCG CCTGCAGGCC
GTCGCGGCGC GCCTGATTCC CCAGGCCCCG CGTTTTCGTC CGGATGCGGC CAACTGGCAG
TGGGAGGTCA ATCTGATCAA GAGCCCCGAG CTCAATGCCA ACTGCGGCCC CGGCGGCAAG
ATCATCTTCT ACAGCGGCAT CATCGAGAAG CTCAAGCTGA CCGACGACGA GATCGCCGCG
ATCATGGGTC ACGAAATGGC GCATGCCCTG CGCGAGCATA GCCGCGAGGC CATGTCCAAG
GCCTATGGCA TCCAGATGGC CAGGCAGGGC GCCGGCGCCT TGCTCGGCCT CGGTGAAGGC
GGAATGGCAT TGGCCGATAC GGTGGTGCAG TACAGCCTGA TGCTGCCCAA CAGCCGCGCC
AACGAGAACG AAGCGGACCT CATCGGCCTG GAGCTGGCGG CCCGTGCGGG GTACAACCCC
AACGCGGCGA TCAGCCTGTG GCAGAAGATG GAGGCCGCTG GCGGCGGTGC GCCGCCCGAG
TTCATGAGCA CTCACCCTTC GTCCAGCAGC CGTATCGCGT CGCTGCAGGC CGCCATTCCC
AAGGTGATGC CACTGTACGA ACAGGCCAGG GCCGGGCGCT GA
 
Protein sequence
MSKVVNLSGL AVALLLAGCQ AVNTTSGGAV GVERKQYMFS MLSAEQVNQM YAQSYQQTLS 
EASSKGVLDK TSNNAKRLQA VAARLIPQAP RFRPDAANWQ WEVNLIKSPE LNANCGPGGK
IIFYSGIIEK LKLTDDEIAA IMGHEMAHAL REHSREAMSK AYGIQMARQG AGALLGLGEG
GMALADTVVQ YSLMLPNSRA NENEADLIGL ELAARAGYNP NAAISLWQKM EAAGGGAPPE
FMSTHPSSSS RIASLQAAIP KVMPLYEQAR AGR