Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3668 |
Symbol | |
ID | 5110129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4053137 |
End bp | 4053958 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640504923 |
Product | peptidase M48, Ste24p |
Protein accession | YP_001189148 |
Protein GI | 146308683 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGG TTGTTAACCT GAGTGGCCTG GCCGTGGCGT TGCTGCTGGC GGGCTGCCAG GCGGTGAATA CCACCAGCGG TGGTGCGGTG GGCGTGGAGC GCAAGCAGTA CATGTTCAGC ATGCTGTCGG CCGAGCAGGT CAACCAGATG TATGCGCAGT CCTATCAGCA GACGCTGAGC GAGGCGTCGA GCAAGGGCGT TCTGGACAAG ACCAGCAATA ATGCCAAGCG CCTGCAGGCC GTCGCGGCGC GCCTGATTCC CCAGGCCCCG CGTTTTCGTC CGGATGCGGC CAACTGGCAG TGGGAGGTCA ATCTGATCAA GAGCCCCGAG CTCAATGCCA ACTGCGGCCC CGGCGGCAAG ATCATCTTCT ACAGCGGCAT CATCGAGAAG CTCAAGCTGA CCGACGACGA GATCGCCGCG ATCATGGGTC ACGAAATGGC GCATGCCCTG CGCGAGCATA GCCGCGAGGC CATGTCCAAG GCCTATGGCA TCCAGATGGC CAGGCAGGGC GCCGGCGCCT TGCTCGGCCT CGGTGAAGGC GGAATGGCAT TGGCCGATAC GGTGGTGCAG TACAGCCTGA TGCTGCCCAA CAGCCGCGCC AACGAGAACG AAGCGGACCT CATCGGCCTG GAGCTGGCGG CCCGTGCGGG GTACAACCCC AACGCGGCGA TCAGCCTGTG GCAGAAGATG GAGGCCGCTG GCGGCGGTGC GCCGCCCGAG TTCATGAGCA CTCACCCTTC GTCCAGCAGC CGTATCGCGT CGCTGCAGGC CGCCATTCCC AAGGTGATGC CACTGTACGA ACAGGCCAGG GCCGGGCGCT GA
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Protein sequence | MSKVVNLSGL AVALLLAGCQ AVNTTSGGAV GVERKQYMFS MLSAEQVNQM YAQSYQQTLS EASSKGVLDK TSNNAKRLQA VAARLIPQAP RFRPDAANWQ WEVNLIKSPE LNANCGPGGK IIFYSGIIEK LKLTDDEIAA IMGHEMAHAL REHSREAMSK AYGIQMARQG AGALLGLGEG GMALADTVVQ YSLMLPNSRA NENEADLIGL ELAARAGYNP NAAISLWQKM EAAGGGAPPE FMSTHPSSSS RIASLQAAIP KVMPLYEQAR AGR
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