Gene Pmen_3666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3666 
Symbol 
ID5110127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4051937 
End bp4052521 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content65% 
IMG OID640504921 
Producthypothetical protein 
Protein accessionYP_001189146 
Protein GI146308681 
COG category[S] Function unknown 
COG ID[COG2119] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGAAT CCCTGTTCGT CCCCACCCTC ATCGTTGCCC TTGCCGAAAT CGGCGACAAG 
ACGCAATTGC TTGCCCTGTT GCTGGCCGCG CGCTTTCGCA AGCCCTGGCC GATCATCTGG
GGCATCGTGG TCGCCACCCT GGCCAACCAT TTCGCCGCAG GTGCCGTTGG CAACTGGGTC
GCCGGATTCT TCTCCCCCGC CACCCTGAGC TGGATACTCG CCGCCAGCTT CATTGCCGTG
GCCGCCTGGA CGCTGATCCC CGACAAGCTG GACGAGGACG AAGCATCCGG CCTGAAGAAG
TACGGCCCCT TCCTCACCAC CCTGATCGCC TTCTTCCTCG CCGAGATGGG CGACAAGACC
CAGGTCGCCA CGGTGATGCT GGCGGCGCAA TACCCGCATT TCGTGCTGGT GGTGATCGGC
ACCACCCTGG GCATGCTGAT CGCCAACGTG CCGGTGGTGC TGGCGGGCAA CTTCGCCGCC
GAGCGTCTGC CGCTGACGCT GATCCGCCGC CTGGCTGCAT GCGCCTTTGC CGCCCTGGCC
GTCTATGCCG GCTACCAGGC GCTGGCGCTG AGCGGGTTGC TATGA
 
Protein sequence
MLESLFVPTL IVALAEIGDK TQLLALLLAA RFRKPWPIIW GIVVATLANH FAAGAVGNWV 
AGFFSPATLS WILAASFIAV AAWTLIPDKL DEDEASGLKK YGPFLTTLIA FFLAEMGDKT
QVATVMLAAQ YPHFVLVVIG TTLGMLIANV PVVLAGNFAA ERLPLTLIRR LAACAFAALA
VYAGYQALAL SGLL