Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3650 |
Symbol | |
ID | 5110111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 4032142 |
End bp | 4032810 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640504905 |
Product | OmpA/MotB domain-containing protein |
Protein accession | YP_001189130 |
Protein GI | 146308665 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGTC TATCCCTGAT CGCCGCCTGC TCCGCTGCAT TGCTGCTGGC CGGCTGCGCC TCGCAGAACC CCTACGACCA GAGCGCCCCG AGCTCGAACA AGACCGCCAC CTACGGCGGC CTGGGGGCGC TGGCCGGTGC CGCAGCGGGG GCGCTGATCA ATCACGACAA CCGCGGCAAG GGGGCGCTGA TCGGCGCCGC GGTGGGCGGT GCGGCCGGTG CCGGTTATGG CTACTACGCC GACAGGCAGG AGGCCGAGCT GCGTCGGCAG ATGCAGGGCA CCGGTGTCGA GGTGCAGCGC CAGGGCGACG TGATTCAGCT GATCATGCCC GGCAACATCA CCTTCGCCAC CGACTCGGCG GAGATCGCCA GCAGCTTCTA CGCGCCGCTG AACAACCTGG CCAACTCCTT CCGCCAGTAC AACCAGAACA GCATCGAGGT GGTCGGCCAC ACCGACAGCA CCGGTTCGCA CAGCTACAAC ATGAGCCTGT CGCAGCGCCG TGCGCAGAGC GTGGCCAGCT ATCTGATCGC TCAGGGAGTG GATGGCAGCC GGGTCAGCAC CCGCGGCATG GGGCCCGATC AGCCGGTGGC GAGCAACGCC ACGGCCGAAG GGCGCGCGCA GAACCGCCGG GTCGAGGTCA CCCTGCGCCC CCTGCCGGGC GTGCAGTAA
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Protein sequence | MSRLSLIAAC SAALLLAGCA SQNPYDQSAP SSNKTATYGG LGALAGAAAG ALINHDNRGK GALIGAAVGG AAGAGYGYYA DRQEAELRRQ MQGTGVEVQR QGDVIQLIMP GNITFATDSA EIASSFYAPL NNLANSFRQY NQNSIEVVGH TDSTGSHSYN MSLSQRRAQS VASYLIAQGV DGSRVSTRGM GPDQPVASNA TAEGRAQNRR VEVTLRPLPG VQ
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