| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3648 |
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| Symbol | |
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| ID | 5110109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4027387 |
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| End bp | 4031100 |
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| Gene Length | 3714 bp |
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| Protein Length | 1237 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640504903 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001189128 |
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| Protein GI | 146308663 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.289797 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGACA GAGCTGTCGA GCGGCCGCAC AGGCCCTGGG TGCCATTGCT GGCTGCGCTG
GGGCTGCTGC TCGGCCTGGG CGGGCTGGTG TTCTGGCAAT GGAGCACCCT TCAGGAGCGC
GAGCGCGAGG ACGCTCAGCG ACGGTTCTTG CTGCAGGCCG AGGATATCGG TCAGCGCATA
ACGGCTCGTA TGCGGACCTA CGAAATGGTC CTGCGCGGTG TGTCCGGGCT GATGATCGGC
AGCGACCAGG TCTCTCCAAT CGAATGGGAG CGTGCCCTGG ACCAGCTCCA GCTGCAGGAC
CGCTACCCCG GCATCCAGGC CGTGGCCTGG GCCCGTTATC TGGCGCCGGA ACAGCTCGCC
GAATTCCGCG TCGAGCTGCA GGCGGACGAA CTCGACGATC AGGTGTTCCC GCCTGGGGAG
CGCGAGCATT ACCTGCCGAT CAAGTACGTC AGCCCGCTGG ATTGGCGCAA CAGGCGGGTG
CTGGGCTTCG ACATGCTCAG CGAAGGGGGC CGCCGCCTGG CCATCGAGCG CGCCATCGAA
ACGGGGCAGG CCAGCCTGAG CGGCCCCTTG GTCCTGCGCC AGGAAATCGA TATCAACGTG
CAGCAGGGCG TTCTGCTGTT CCTGCCGGTA TTTCGTCCCA GAATGCCGCT CAATACGCCG
GAGCAGCGCC GTGCTGCGCT GCTGGGGATG GTCCATGGCG CGTTTCGCAG CCACGATCTG
ATGGAAGGCA TTCTGGGCAG CCAGACACGC CATTTCGACA TCGTGCTCCG GGATGTGAGC
GCACAAGGTG GTGAACTGCT GCGTGGCGAG GCCCCGGCCA ATGGCTGGGT GCCGCGTTTC
AGCAGTCAGT TGCAGCTGCC GCTCTACGGG CGCAACTGGG AGCTGGCGTT GACGGGCACG
CCCGAATACG AGCGTAGCCT GATTGACCGC TCCGGTACGT TCAGCCTCTG GTCCGGCCTT
GCCGTGGCGC TGCTGCTGGC CCTGCTGGTC GGCGGCTATC TCTATCAGCG CGAGCGCAAG
CTGCACATGA GCGAGCAGGC CGCGCGAGAC CTGCAGGAGC GCGAGGAGCG TTTTCGCCTG
CTGGTGGAGC GTCTGCCGGT GGCCACCGTA CTCTGTGACG CCAAGGGGCG GATCGAGATG
GCCAACCGCA GCGCCGCCGA ACTCTTCGAC TGCCCGCTCA ATGGTTTGCT CGGCGAGACG
GTGCTGCGCG TGCTGCCCAA CATCGAATCG CCGCAGGATC TGCAGGAGCA ACTGGGCGAG
AGTGACGAGC GCATGGTGCG AACCCTGCGT GGCGAGTCGA TCCCGGTGAG CATCAGCCTC
AACCCGCTGC ACGAGGGCAG CAGCTACCTG ATCAACCTGG TGGATCTGCG TGCGCGCAAG
GTGGCGGAAG AGCGCTTCCG CCTGGTGGTG GAGGCGTCGC CCAATGCCAT CGTGCTGGTG
GACGGTCTCG GCCGAATTGC CATGGTCAAC CGGCAGACCG AACAGATGTT CGGCTACGAA
CGGCAGATGC TGCTTGGCGA ACCGATCGAG ATGCTGCTGC CCGCGGCTCT GCGGGGCGGT
CATGTGGCGC TGCGCAGGGG TTATCAGGCC ATGCCCGAAC AGCGCCGTAT GGGCGGCAAC
CGCGAACTGT TCGGCCAGCA TCGCGAGGGG CGGCTGATAC CGCTGGAGGT CGGCCTGTCG
CCAATCCGCA GCGGCAACGA AAGCCTGGTG CAGGCGGTGA TCATCGATAT CAGCGAGCGC
AGGGCCGCAG AGCAGAAGTT GCGCGAGCAG GCCGAGCAGT TGCTGCTGGC CAACCGCTAC
AAGTCCGAAT TCCTCGCCAA CATGTCCCAT GAGCTGCGCA CGCCGCTCAA CAGCATCCTG
ATTCTCAGCG ACCAGCTGCG GCAGAATCTG GCCGGCAATC TCACCGAGAA GCAGACCAAG
CATGCCGACA TCGTGCATCG CGCCGGCAGC GACCTGCTGC AGCTGATCAA CGATGTCCTC
GACCTGGCCA AGGTGGAGTC GGGGCGCATG CAGCTCAAGC TCGAACCGAT CAACATGCAG
GACGTGCTGG TGGAACTGGA CGCCAGCCTG CGGCCGATGG CGGAGCTCAA GGGGCTCAGC
CTGCATACCC AGATCGACGC CGGTGTGCCG CGCGTCATCC ACAGCGACCG GGTGCGTCTG
CACCAGATTC TGCGCAACCT GCTGTCCAAC GCGCTGAAAT TCACCGACCA GGGCGAGGTG
ACCCTGACCG TCAGCAGCGA AGGCCGGCAG GAAGACGAGC GCGAGCTGCT CTGCTTCAGT
GTGCGCGATA CCGGCATCGG CATCGATCCG GCCCAGCACG AGCAGGTGTT TCAGGCCTTC
CAGCAGATCG ACGGCTCCAC CAGCCGGCGC TTCGGCGGCA CGGGCCTGGG GCTCGCCATC
ACCCGCCAGC TGGTGCTGGC GCTCGATGGC GATATCGGCC TGCAGAGCAC GCCGGGTCAG
GGCTCGACCT TTACCGTCAG ATTGCCGGTG CAGAGCGCAC CCGCCACAGC GGAGCCTGCC
ACCGAAGGCC CTCAGCGGGC CGGCGATGGT CCGCCGCTGC TGATCGTCGA GGACGATGCC
AACTTCGCCG CGGTCATCGC CGAGGAGGCG CATGCCCATG GCTTTTCCAG CGTGCATTGC
CGCACCGGCC TGCAGGCACT GGGGCTGTTG CAGCAGGAGA GCTTCAATGC GGTCATCCTC
GACATCCTGC TGCCTGATCT CAGCGGCTGG CAGCTGTTCC GGCGCTTGCG CGCCCAGCCG
AGCCATCGCT ACACCCCGGT GCACATCATT TCCTGCGTGC CGCAGCCGGT GGGCTGGAAC
GACGACGGCA CGCGCTATCT GGTCAAGCCC ATCGGCCGCG ACGAACTGGA ACAGGTGTTT
CTGGAGCTGC AGCATGGCGC CGCTCACGAG CAGGCGTTAC TGCTGGTGGA GGACGTGGCG
GTCGAGCGTG AGCACTACCG CGAACATCTC GCCCAGCTGG GGTTCGTCGT GACCGCCTGT
GCCAATGCCG AGGAGGCCCG TGCGGCCTAC GCCAATGGCG AGTTCGCCGC CCTGGTGATC
GACCTCGACC TGCCCGACCA GGACGGTTTC GCCCTGCTCG ACAGCCTCAA CCAGCTGCGG
CCGTTGCAGG GTATGCGCGT GGTGATCAAC ACCGGCGTGG ACGTCACCCA GCAGACCCTG
CAGCGCCTGC GCCGCTACAG TGCGGTGGTG GTGCGCAAGC ATGGCGATGA CACCGAGGCG
CTGTGCCAGG CAGTGCAGGG TTTTCTCGGC GACGTGCGCA CGCCGCAGCA GGCCCACCCG
CGCCTCAATC CGCTGCAGGG GCGGCGCATC CTGCTGGTGG ACGACGACGT GCGCAACGTC
TACGCCCTCA CGGCCCTGCT CGATGAAGTG GGACTGCACG TCAGCTCGGC GAAGGATGGC
ATCGAGGCGA TCGCCGCCTA CCAGCGCGAC ACCTTCGATC TGATCCTGAT GGATATGGCC
ATGCCCAACA TGGACGGCTA CACCGCCACG CGGCTGCTCA AGCAGGAGCA CGGTTGCAGC
ATTCCGATCA TCGCCCTGAC CGCCCACGCC ATGAAGGGGG ACCGGGAGAA ATGCATCACC
GCCGGTGCCG ACGACTACAT GGCCAAACCC ATCAAGCGAG ACGAGCTGAT TGCGCTTCTG
GAGCGCTGGT TGAGCATGCC GCTCATGACG TCTGCCAGTA ATGAACTAAC CTGA
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| Protein sequence | MDDRAVERPH RPWVPLLAAL GLLLGLGGLV FWQWSTLQER EREDAQRRFL LQAEDIGQRI
TARMRTYEMV LRGVSGLMIG SDQVSPIEWE RALDQLQLQD RYPGIQAVAW ARYLAPEQLA
EFRVELQADE LDDQVFPPGE REHYLPIKYV SPLDWRNRRV LGFDMLSEGG RRLAIERAIE
TGQASLSGPL VLRQEIDINV QQGVLLFLPV FRPRMPLNTP EQRRAALLGM VHGAFRSHDL
MEGILGSQTR HFDIVLRDVS AQGGELLRGE APANGWVPRF SSQLQLPLYG RNWELALTGT
PEYERSLIDR SGTFSLWSGL AVALLLALLV GGYLYQRERK LHMSEQAARD LQEREERFRL
LVERLPVATV LCDAKGRIEM ANRSAAELFD CPLNGLLGET VLRVLPNIES PQDLQEQLGE
SDERMVRTLR GESIPVSISL NPLHEGSSYL INLVDLRARK VAEERFRLVV EASPNAIVLV
DGLGRIAMVN RQTEQMFGYE RQMLLGEPIE MLLPAALRGG HVALRRGYQA MPEQRRMGGN
RELFGQHREG RLIPLEVGLS PIRSGNESLV QAVIIDISER RAAEQKLREQ AEQLLLANRY
KSEFLANMSH ELRTPLNSIL ILSDQLRQNL AGNLTEKQTK HADIVHRAGS DLLQLINDVL
DLAKVESGRM QLKLEPINMQ DVLVELDASL RPMAELKGLS LHTQIDAGVP RVIHSDRVRL
HQILRNLLSN ALKFTDQGEV TLTVSSEGRQ EDERELLCFS VRDTGIGIDP AQHEQVFQAF
QQIDGSTSRR FGGTGLGLAI TRQLVLALDG DIGLQSTPGQ GSTFTVRLPV QSAPATAEPA
TEGPQRAGDG PPLLIVEDDA NFAAVIAEEA HAHGFSSVHC RTGLQALGLL QQESFNAVIL
DILLPDLSGW QLFRRLRAQP SHRYTPVHII SCVPQPVGWN DDGTRYLVKP IGRDELEQVF
LELQHGAAHE QALLLVEDVA VEREHYREHL AQLGFVVTAC ANAEEARAAY ANGEFAALVI
DLDLPDQDGF ALLDSLNQLR PLQGMRVVIN TGVDVTQQTL QRLRRYSAVV VRKHGDDTEA
LCQAVQGFLG DVRTPQQAHP RLNPLQGRRI LLVDDDVRNV YALTALLDEV GLHVSSAKDG
IEAIAAYQRD TFDLILMDMA MPNMDGYTAT RLLKQEHGCS IPIIALTAHA MKGDREKCIT
AGADDYMAKP IKRDELIALL ERWLSMPLMT SASNELT
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