Gene Pmen_3645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3645 
Symbol 
ID5110106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4021959 
End bp4024052 
Gene Length2094 bp 
Protein Length697 aa 
Translation table11 
GC content67% 
IMG OID640504900 
Productphosphate acetyltransferase 
Protein accessionYP_001189125 
Protein GI146308660 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0280] Phosphotransacetylase
[COG0857] BioD-like N-terminal domain of phosphotransacetylase 
TIGRFAM ID[TIGR00651] phosphate acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATACCT TCTTCATCGC CCCCACCGGC TTCGGTGTCG GTCTCACTTC CATCAGCCTC 
GGCCTGGTCG GCGCGCTGGA GCGCAGCGGC CTCAAGGTCG GCTTCTTCAA GCCCATTGCC
CAGCCGCATG CCGGCGACCT CGGCCCGGAG CGTTCCAGCG AGCTGATCGC CCGCACCCAC
GGCCTGCACT CGCCCAAACC GCTGCCGCTC AGCCATGTCG AACGCATGCT CGGCGACGGC
CAACTGGATG AATTGCTGGA AGATATCATC AGCCTCTATC AGCAGGCCGC CGCCGACAAG
GACGTGGTCA TAGTCGAAGG CATGGTGCCG ACGCGCCACG CCAGTTACGC CGCGCGGGTC
AACTTCCACC TGGCCAAGAG CCTGGATGCC GACGTGATCC TGGTCAGCGC GCCGGAGGAC
GAGAGCCTCA CCGAACTGTC CGACCGCATC GAGATCCAGG CGCAGCTGTT CGGCGGCCCC
AAGGACCCGA AGGTGCTCGG CGTGATCCTC AACAAGGTGC GCAGCGAGGA CGGCATCGAG
GCCTTCGCCG AACGTCTGCA GGAGTTCTCG CCGCTGCTCA AGACCGAGGA CTTTCGCCTG
CTCGGCTGCA TCCCCTGGCA GGATGAACTG AATGCGCCAC GCACCAAGGA CATCGCCGAG
CTGCTCGGCG CCCGCATCCT CAACGCCGGC GACTACGAAC AGCGGCGCAT GCTCAAGATC
GTGCTCTGCG CCCGCGCCGT GGCCAACAGC GTGCAACTGC TCAAGCCCGG CACCCTGGTG
GTGACGCCGG GGGACCGCGA CGACATCATT CTCTCCGCCT GCCTGGCGGC GATGAACGGC
GTGCCGTTGG CCGGTCTGCT CCTGTGCAGC GATTTCGCCC CCGACCCGCG CATCATGGAA
CTGTGCAATG GCGCACTGGC CAGCGGCCTG CCGGTGATGA CGGTGAGCAC CGGCTCCTAC
GACACCGCCA CCAACCTCAA CCGGTTGAAC AAGGAAATCC CGGTGGACGA CCGCGAGCGC
GCCGAGAAGG TCTCCGACTT CGTCGCCGGG CATATCGACC ACGACTGGCT GACCACCCGC
TGCGGCACTC CGCGCGAGCT GCGTCTGTCA CCACCGGCGT TCCGCTACCA GCTGGTGCAA
CGGGCCAAGG CCGCGGCCAA GCGCATCGTC CTGCCCGAAG GCAGCGAACC GCGCACCGTG
CAGGCAGCGG CCATCTGCCA GGCGCGCGGC ATCGCCCGTT GCGTGCTGCT GGCCAAGCCG
GAAGACGTGC ATGCAGTGGC CCGCGCGCAG GGCATCGAAC TGCCGGAAGG GTTGGAGATT
CTCGACCCGG ACCTGATTCG CGGCCGCTAC GTCGAGCCGA TGGTCGAGCT GCGCAAGGGC
AAGGGCCTCA ACGCCCCGAT GGCCGAGGCA CAGCTGGAAG ACACCGTGGT GCTCGGCACC
ATGATGCTCG CCCTGGACGA GGTCGATGGC CTGGTGTCGG GCGCCATCCA CACCACCGCC
AATACCATCC GCCCGGCGCT GCAGCTGATC AAGACGGCAC CCGGCTACAA CCTGGTGTCC
TCGGTGTTCT TCATGCTGCT GCCGGATCAG GTGCTGGTCT ACGGCGACTG CGCGGTGAAC
CCCGACCCCA ATGCCGAACA GCTGGCCGAA ATCGCTCTGC AGAGCGCCAA CTCGGCGCAG
GCTTTCGGCA TCGAACCGCG AGTGGCCATG CTCAGCTACT CCACCGGCGA CTCCGGCAGC
GGCGAGGAAG TGGAGAAGGT GCGCGCCGCC ACCCGCCTGG CCCGCGAAAA ACGCCCGGAT
CTGCTGCTCG ACGGTCCGCT GCAGTACGAC GCCGCCGCCA TCGAGAGCGT CGGCCGGCAG
AAGGCGCCGA ACAGCCCGGT GGCCGGCCGC GCCACGGTGT TCGTGTTCCC CGACCTGAAC
ACCGGCAACA CCACCTATAA GGCGGTCCAG CGCAGCGCCG ACTGCATCAG CGTCGGCCCC
ATGCTGCAGG GCCTGCGCAA GCCGGTGAAC GACCTGTCAC GCGGCGCCCT GGTCGACGAC
ATCGTCTACA CCATCGCCCT CACCGCGATC CAGGCGGCCA ACCTGCCGAG CTGA
 
Protein sequence
MHTFFIAPTG FGVGLTSISL GLVGALERSG LKVGFFKPIA QPHAGDLGPE RSSELIARTH 
GLHSPKPLPL SHVERMLGDG QLDELLEDII SLYQQAAADK DVVIVEGMVP TRHASYAARV
NFHLAKSLDA DVILVSAPED ESLTELSDRI EIQAQLFGGP KDPKVLGVIL NKVRSEDGIE
AFAERLQEFS PLLKTEDFRL LGCIPWQDEL NAPRTKDIAE LLGARILNAG DYEQRRMLKI
VLCARAVANS VQLLKPGTLV VTPGDRDDII LSACLAAMNG VPLAGLLLCS DFAPDPRIME
LCNGALASGL PVMTVSTGSY DTATNLNRLN KEIPVDDRER AEKVSDFVAG HIDHDWLTTR
CGTPRELRLS PPAFRYQLVQ RAKAAAKRIV LPEGSEPRTV QAAAICQARG IARCVLLAKP
EDVHAVARAQ GIELPEGLEI LDPDLIRGRY VEPMVELRKG KGLNAPMAEA QLEDTVVLGT
MMLALDEVDG LVSGAIHTTA NTIRPALQLI KTAPGYNLVS SVFFMLLPDQ VLVYGDCAVN
PDPNAEQLAE IALQSANSAQ AFGIEPRVAM LSYSTGDSGS GEEVEKVRAA TRLAREKRPD
LLLDGPLQYD AAAIESVGRQ KAPNSPVAGR ATVFVFPDLN TGNTTYKAVQ RSADCISVGP
MLQGLRKPVN DLSRGALVDD IVYTIALTAI QAANLPS