| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3634 |
|---|
| Symbol | |
|---|
| ID | 5110095 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 4008846 |
|---|
| End bp | 4010540 |
|---|
| Gene Length | 1695 bp |
|---|
| Protein Length | 564 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640504889 |
|---|
| Product | L-lactate transport |
|---|
| Protein accession | YP_001189114 |
|---|
| Protein GI | 146308649 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1620] L-lactate permease |
|---|
| TIGRFAM ID | [TIGR00795] L-lactate transport |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAACG GAATTCTCGC CCTGCTGGCG TTCTCTCCCA TCCTGCTGGC AGCCGTGTTG
CTGATCGGTC TGCGCTGGCC GGCCAAGCGC GCCATGCCGC TGGTGTACCT GGTCACCGCC
GCCGTCGGCC TGTTCGCCTG GGACATGACC CTCAACCGCG TGCTGGCCTC GACCCTGCAG
GGCCTGCTGA TCACCCTGGG TCTGCTGTGG ATCATCTTCG GCGCCATCCT GCTGCTCAAC
ACCCTCAAGC ACTCCGGCGG CATCACCGCG ATCCGCGCCG GCTTCACCAC CATCAGCCCT
GACCGCCGCA TCCAGGCGAT CATCATCGCC TGGCTGTTCG GCTGCTTCAT CGAGGGCGCC
TCGGGCTTCG GCACGCCAGC GGCCATCGCC GCACCGCTGC TGGTAGCCAT CGGTTTCCCG
GCCATGGCCG CGGTGCTGAT GGGCATGCTG GTGCAGAGCA CGCCGGTGTC CTTCGGCGCG
GTCGGCACGC CGATCATCGT CGGCATCAAC ACCGGTCTGG ACACCGCCAC CATCGGCGCA
CACCTGGTGG AGCAGGGTTC GTCCTGGGCG CAGTTCCTGC AGCTGATCAC CAGCCAGGTG
GCGATCATCC ACGCCACCGT CGGCGTGGTC ATGCCGCTGG TGATGGCGAT GATGCTGACG
CGTTTCTTCG GTCAGGAGAA AAGCTGGAAA GCCGGTCTGG AAGTGCTGCC ATTCGCCCTC
TTCGCCGGCC TGGCCTTCGT CCTGCCCTAC GCCGCCACCG GCGTGTTCCT CGGCCCGGAA
TTCCCCTCGC TGCTGGGTGG TCTGATCGGC CTGGCCATAG TCACCAGCGC CGCCCGCTTC
GGCTTCTTGG TGCCGAAGAA GACCTGGGAC TTCGCCCCGG CCGACAAGTG GCCGAGCGAA
TGGCTGGGCA CCGTCGAGAT GAAGCTGGAC GAGCTGACCG CCAAGCCGAT GAGCGCCCTG
CGCGCCTGGC TGCCCTATGT GCTGGTCGGC GCCCTGCTGG TGATCAGCCG TGTGTTCCCG
GAAGTGGGCA ACGCGCTCAA GGCGGTGGTG GTGAACTTCC CCGACCTGCT CGGCGAAACC
GGCATCAGCG CCAACTTCCA ACCGCTCTAC CTGCCGGGTG GCATTCTGGT CGCCGTGGTT
CTGGCCACCT TCTTCCTGCA CGGCATGAAG GTGCGTGAGC TGAGCAAGGC GGTGAAGGAA
TCGTCCAGCG TGCTGCTCAG CGCCGGCTTC GTGCTGCTGT TCACCGTGCC GATGGTGCGC
ATCCTGATCA ACTCCGGTGT CAACGGCGCC GAGCTGGCCA GCATGCCGAT CCTGATGGCG
CGCTGGGTGG CCGACAGCGT CGGCGGCATC TATCCGCTGC TGGCACCGAG CATCGGTGCC
CTGGGTGCCT TCATCGCCGG CTCCAACACG GTGAGCAACA TGATGTTCAG CCAGTTCCAG
TTCGGTGTAG CCAGCAGCCT TGGCATCTCC GGCGCGCTGA TCGTCGCCGT GCAGGCCATC
GGCGCCGCGG CCGGCAATAT GGTGGCGATC CACAACGTGG TCGCCGCGTC GGCCACCGTC
GGCCTGCTCG GTCGCGAAGG CAGCACGCTG CGCAAGACCA TCTGGCCGAC GCTGTACTAC
GTGCTGTTCA CCGGCAGCAT CGCGATGCTG GCGATCTACG TGCTGGGGGT CAGCGATCCG
CTGGTAGCCG GCTGA
|
|---|
| Protein sequence | MSNGILALLA FSPILLAAVL LIGLRWPAKR AMPLVYLVTA AVGLFAWDMT LNRVLASTLQ
GLLITLGLLW IIFGAILLLN TLKHSGGITA IRAGFTTISP DRRIQAIIIA WLFGCFIEGA
SGFGTPAAIA APLLVAIGFP AMAAVLMGML VQSTPVSFGA VGTPIIVGIN TGLDTATIGA
HLVEQGSSWA QFLQLITSQV AIIHATVGVV MPLVMAMMLT RFFGQEKSWK AGLEVLPFAL
FAGLAFVLPY AATGVFLGPE FPSLLGGLIG LAIVTSAARF GFLVPKKTWD FAPADKWPSE
WLGTVEMKLD ELTAKPMSAL RAWLPYVLVG ALLVISRVFP EVGNALKAVV VNFPDLLGET
GISANFQPLY LPGGILVAVV LATFFLHGMK VRELSKAVKE SSSVLLSAGF VLLFTVPMVR
ILINSGVNGA ELASMPILMA RWVADSVGGI YPLLAPSIGA LGAFIAGSNT VSNMMFSQFQ
FGVASSLGIS GALIVAVQAI GAAAGNMVAI HNVVAASATV GLLGREGSTL RKTIWPTLYY
VLFTGSIAML AIYVLGVSDP LVAG
|
|---|
| |