Gene Pmen_3632 details

Gene Information

• Locus tag: Pmen_3632
• Symbol: smpB
• ID: 5110093
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas mendocina ymp
• Kingdom: Bacteria
• Replicon accession: NC_009439
• Strand: +
• Start bp: 4007006
• End bp: 4007527
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 640504887
• Product: SsrA-binding protein
• Protein accession: YP_001189112
• Protein GI: 146308647
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 40
• Fosmid unclonability p-value: 0.865786
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCGCAGG CGTGGGCGAC TCCCTATAAT GCGCGCCCTA TGGCTAAGCA AAAGAAACAC 
CCTCAAGGCA CCATCGCGCT GAACAAGAAG GCGCTGCACG ATTACTTCGT CGAACAGAAG 
TTCGAGGCGG GCGTCGCCCT GGCCGGCTGG GAAGTCAAGA GCCTGCGCGC CGGCAAGGCG 
CAGCTGGTGG ACAGCTACGT GCTGCTCAAG GACGACGAGG CCTGGCTGAT GGGCGCGCAT 
ATCACGCCGC TGAAAACCGC CAGCACCCAC GTCATCGCCG ACCCCATCCG CACCCGCAAG 
CTGCTGCTGC ACAAACGCGA GCTGGACAAG CTGTTCGGCG CCGTGCAGCA GAAGGGTTAC 
ACCTGCGTGG CCCTGTCGCT GTACTGGAAG CAGCACCTGG TCAAATGCGA GATCGCCCTG 
GCCAAGGGCA AGAAGGATTT CGACAAGCGT CACGTCGAGA AGGAACGCGA CGCCAACCGC 
GAAGTCCAGC GCGCCATGCG CAGCAAGGGC AAGGACGACT GA 

 

Protein sequence

MAQAWATPYN ARPMAKQKKH PQGTIALNKK ALHDYFVEQK FEAGVALAGW EVKSLRAGKA 
QLVDSYVLLK DDEAWLMGAH ITPLKTASTH VIADPIRTRK LLLHKRELDK LFGAVQQKGY 
TCVALSLYWK QHLVKCEIAL AKGKKDFDKR HVEKERDANR EVQRAMRSKG KDD