Gene Pmen_3630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3630 
Symbol 
ID5110091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4005080 
End bp4005514 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content64% 
IMG OID640504885 
Productcyclase/dehydrase 
Protein accessionYP_001189110 
Protein GI146308645 
COG category[I] Lipid transport and metabolism 
COG ID[COG2867] Oligoketide cyclase/lipid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACTC GAATCCAGCG TTCGGCGTTG TTGCCCTATC CGGCGCAGGC GCTGTTTGAT 
CTCGTCAACG ACGTGGCCCG TTACCCCGAG TTTCTGCCCT GGTGCAGCAG CAGTCAGGTT
CTGGAAGTGA GCGAGAGCCA TATGCTGGCC AGCCTCGAGG TGGCCAAGGG CGGGCTCAGC
CAGCGCTTCG TCACGCGCAA TGCGCTGCAG CCCGGCGAGC GCATCGAGAT GAACCTGCAG
GAGGGACCTT TCACCCGCCT GCATGGCGTC TGGGAGTTCA AGGCGCTGGG CGACAAGGCC
TGCAAGATCA GCCTGGACCT GACCTTCGAC TACGCCGGGC CGCTGGTGCG CGCCACGCTC
GGCCCCCTGT TCAATCAGGC AGCCAACACC ATGGTCGATG CCTTCTGCCA GCGAGCCAAG
CAACTGCATG GATAA
 
Protein sequence
MATRIQRSAL LPYPAQALFD LVNDVARYPE FLPWCSSSQV LEVSESHMLA SLEVAKGGLS 
QRFVTRNALQ PGERIEMNLQ EGPFTRLHGV WEFKALGDKA CKISLDLTFD YAGPLVRATL
GPLFNQAANT MVDAFCQRAK QLHG