Gene Pmen_3625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3625 
Symbol 
ID5110086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4001164 
End bp4001733 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content66% 
IMG OID640504880 
Productheat shock protein GrpE 
Protein accessionYP_001189105 
Protein GI146308640 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.42288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACG AACAGAACCT GGATACGCAG AACCCCGAAG CGCAGGCGGC CGAGAATGCC 
GCGCCGAGCG ACGACCTGGC GGCTCGCGTG CAGGCCCTGG AAGAGCAGCT GGCTGCGGCG
CAGGATCAGT CGCTGCGCAT GGCGGCCGAG CTGCAGAACG TACGTCGTCG CGCCGAGCAG
GATGTGGAGA AGGCGCACAA GTTCGCACTG GAGAAGTTCG CCAACGATCT GCTGCCGGTC
GTCGATAGCC TGGAGCGCGG CCTGGAGCTG TCGAGCCCGG ACGACGAGGC GATCAAGGGC
GTGCGCGAGG GCATGCAACT GACCCTCAAG CTGTTCATCG ACACCCTGGC GCGTCATCAG
CTCGAGGCGG TCGAGCCGCA TGGCGAGCCG TTCAACCCGG AGCACCATCA GGCCATGGCG
ATGGAAGAAA GCACCCACGT CGAGCCGAAC TCGGTGCTCA AGGTGTTCCA GAAGGGTTAT
CTGCTCAATG GCCGTCTGCT GCGCCCGGCC ATGGTCGTGG TCAGCAAGGC GCCGACCACG
CCGCCGCCGT CCATCGACGA GCAGGCTTGA
 
Protein sequence
MADEQNLDTQ NPEAQAAENA APSDDLAARV QALEEQLAAA QDQSLRMAAE LQNVRRRAEQ 
DVEKAHKFAL EKFANDLLPV VDSLERGLEL SSPDDEAIKG VREGMQLTLK LFIDTLARHQ
LEAVEPHGEP FNPEHHQAMA MEESTHVEPN SVLKVFQKGY LLNGRLLRPA MVVVSKAPTT
PPPSIDEQA