| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3616 |
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| Symbol | |
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| ID | 5106163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3990440 |
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| End bp | 3991063 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640504871 |
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| Product | ribosomal RNA methyltransferase RrmJ/FtsJ |
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| Protein accession | YP_001189096 |
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| Protein GI | 146308631 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0293] 23S rRNA methylase |
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| TIGRFAM ID | [TIGR00438] cell division protein FtsJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.258856 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCACGTT CCAAGACCAG CCAGCGTTGG CTGAAAGAAC ATTTCGATGA TCCTTACGTG
AAGATGGCGC AGAAGGACGG CTATCGCTCG CGCGCCAGCT ACAAGCTGCT GGAAATCCAG
GAAAAGGATC GCATCCTGCG TCCGGGCATG ACCGTGGTCG ATCTCGGCGC CGCGCCGGGC
GGTTGGTCGC AGGTCACCAG TCGGGTGATC GGCGACAAGG GGCGTCTGAT CGCCTCGGAT
ATTCTGGAAA TGGACAGCAT TCCCGATGTC ACCTTCATTC AGGGTGACTT CACCGACGAT
GCGGTCTTCG CGCGCATTCT CGAGGCCATT GGCGAGAATC CGGTCGACCT TGTTATTTCC
GATATGGCCC CCAATATGAG TGGGGTGAGG GCGGCCGATC AGCCGCGCGC CATGTACCTG
TGCGAACTGG CGCTGGATCT GGCCGGGCGC GTGCTGCGCC CCGGTGGCGA TTTCCTCATC
AAGATTTTCC AGGGTGAAGG CTTCGACACC TACCACAGGC AGGTGCGCGA CAGCTTCGAC
AAGGTGCAGA TGCGCAAACC GCTGTCCTCG CGCGATCGTT CGCGTGAGCA GTATTTGTTG
GCGCGTGGCT TTCGCGGCGT GTGA
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| Protein sequence | MARSKTSQRW LKEHFDDPYV KMAQKDGYRS RASYKLLEIQ EKDRILRPGM TVVDLGAAPG
GWSQVTSRVI GDKGRLIASD ILEMDSIPDV TFIQGDFTDD AVFARILEAI GENPVDLVIS
DMAPNMSGVR AADQPRAMYL CELALDLAGR VLRPGGDFLI KIFQGEGFDT YHRQVRDSFD
KVQMRKPLSS RDRSREQYLL ARGFRGV
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