Gene Pmen_3610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3610 
Symbol 
ID5106157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3984086 
End bp3984544 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content57% 
IMG OID640504863 
Producthypothetical protein 
Protein accessionYP_001189090 
Protein GI146308625 
COG category[S] Function unknown 
COG ID[COG0779] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGAGCA AGCTAGAACA GTTGCAGGCC TTGTTGGCCC CGGTAATCGA AGCGCTCGGT 
TATCAGTGTT GGGGCATCGA GTTCCTGTCG CAGGGGCGTC ATTCGCTGCT GCGTGTCTAT
ATCGATAAGG CCGATGGCAT CCTGATCGAC GATTGCGAGA TCGTCAGCCG TCAGCTCAGT
GGTGTGCTCG ACGTCGAGGA CCCGATTTCC TCGGAGTACA CGCTGGAAGT TTCTTCTCCT
GGCATGGATA GACCGTTGTT CACGCTTGAG CAGTTCGCGG CGCATGTCGG TGAGCAGGTG
AAGATCAAGT TGCGCTCGCC CTTCGAGGGG CGTCGCAATT TCCAGGGCCT CCTCCGCGGC
GTGGAGGAGC AGGACGTGGT GGTACAGGTG GATGACCACG AGTATCTGTT GCCGATCGAT
CTGATCGACA AGGCCAATAT CATCCCCCGA TTTGATTGA
 
Protein sequence
MSSKLEQLQA LLAPVIEALG YQCWGIEFLS QGRHSLLRVY IDKADGILID DCEIVSRQLS 
GVLDVEDPIS SEYTLEVSSP GMDRPLFTLE QFAAHVGEQV KIKLRSPFEG RRNFQGLLRG
VEEQDVVVQV DDHEYLLPID LIDKANIIPR FD