| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3609 |
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| Symbol | nusA |
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| ID | 5106156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3982444 |
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| End bp | 3983925 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640504862 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_001189089 |
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| Protein GI | 146308624 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAG AAGTACTGCT GGTTGTTGAG TCGGTATCCA ACGAGAAGGG TGTACCGGCC
GGCGTGATTT TCGAGGCGCT GGAGCTGGCT CTGGCGACCG CCACCAAGAA GCGTTTCGAA
GACGAAGTCG ATCTGCGTGT GTCGATCAAT CGTCAGAACG GTAGCTACGA AACCTTCCGT
CGCTGGACCG TGGTCGACGA GTCCGAGTTC GAAGATCCGG CCTATCAGCT GACCGAGGAC
ATGCCGCAGG CCGTTGAAGC CAAGGCCAAG ATCGGCGATG TGCTCGAAGA GAAGGTCGAG
TCCATCGAGT TCGGTCGCAT CGCTGCGCAA ACCGCCAAGC AGGTCATCGT GCAGAAGGTG
CGCGAAGCCG AGCGCGCCCA GGTGGTCGAT GCCTACCGCG AGCGTCTGGG CGAGATCATC
TCGGGTACCG TGAAGAAGGT CACCCGCGAC AACGTCATCG TCGACCTGGG CAACAATGCC
GAGGCGCTGC TGGCCCGCGA AGACATCATC CCGCGCGAGA CTTTCCGCGT CGGTGTGCGC
CTGCGTGCCC TGCTCAAGGA AATCCGTACC GAGAACCGCG GCCCGCAGCT GATCCTGTCG
CGTACCGCGC CGGAAATGCT GATCGAGCTG TTCCGCATCG AAGTACCTGA AATCGCCGAA
GGGCTGATCG ACGTCAAGGC CGCCTCCCGT GATCCGGGTT CGCGCGCCAA GATCGCCGTG
CGTTCCAAGG ACAAGCGCAT CGACCCGCAG GGCGCCTGCA TCGGCATGCG CGGTTCGCGC
GTGCAGGCCG TTTCCGGCGA GCTGGGCGGT GAGCGCGTGG ATATCGTGCT GTGGGACGAC
AACCCCGCAC AGTTCGTCAT CAACGCCATG TCGCCGGCCG AGGTGGCAGC GATCATCGTC
GACGAAGATG CCCATGCCAT GGACATCGCC GTCGCCGAAG ACAACCTGGC TCAGGCCATC
GGTCGTGGCG GTCAGAACGT ACGCCTGGCC AGCCAGCTGA CCGGCTGGAC CCTGAACGTG
ATGACCGAAG CGGACATCCA GGCCAAGCAG CAGGCGGAAA CCGGCGACAT CATGCAGTCC
TTCATCGACG AGCTGGAAGT CGACGAAGAG CTGGCTCAAG TCCTGGTCGA AGAGGGTTTC
ACCAGTCTCG AAGAGATTGC CTACGTACCC ATGGAAGAAA TGCTCAGCAT CGATGGCTTC
GACGAGGAGA TCGTCAACGA GCTGCGTGCA CGGGCCAAGG ATCGTCTGCT GACCAAGGCG
ATCGCCAACG AGGAGAAGTT GGCCGATGCC CATCCGGCAG ATGATTTGCT GGAACTGGAA
GGCATGGACA AGGCGCTGGC TCTCGAGCTT GCGCTGCGCG GCGTGATTAC CCGTGAAGAC
CTGGCCGAGC AGTCGATCGA CGACCTGCTC GACATCGACG GCATCGACGA AGAACGTGCC
GGCAAGCTGA TCATGGCCGC TCGAGCCCAC TGGTTCGAAT AA
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| Protein sequence | MSKEVLLVVE SVSNEKGVPA GVIFEALELA LATATKKRFE DEVDLRVSIN RQNGSYETFR
RWTVVDESEF EDPAYQLTED MPQAVEAKAK IGDVLEEKVE SIEFGRIAAQ TAKQVIVQKV
REAERAQVVD AYRERLGEII SGTVKKVTRD NVIVDLGNNA EALLAREDII PRETFRVGVR
LRALLKEIRT ENRGPQLILS RTAPEMLIEL FRIEVPEIAE GLIDVKAASR DPGSRAKIAV
RSKDKRIDPQ GACIGMRGSR VQAVSGELGG ERVDIVLWDD NPAQFVINAM SPAEVAAIIV
DEDAHAMDIA VAEDNLAQAI GRGGQNVRLA SQLTGWTLNV MTEADIQAKQ QAETGDIMQS
FIDELEVDEE LAQVLVEEGF TSLEEIAYVP MEEMLSIDGF DEEIVNELRA RAKDRLLTKA
IANEEKLADA HPADDLLELE GMDKALALEL ALRGVITRED LAEQSIDDLL DIDGIDEERA
GKLIMAARAH WFE
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