| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3608 |
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| Symbol | infB |
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| ID | 5106155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3979930 |
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| End bp | 3982416 |
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| Gene Length | 2487 bp |
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| Protein Length | 828 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640504861 |
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| Product | translation initiation factor IF-2 |
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| Protein accession | YP_001189088 |
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| Protein GI | 146308623 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAAG TCACGGTGAA AGAACTGGCC AAAGTGGTCG ACACCCCGGT AGAGCGCCTG
CTGCAGCAGA TGCGTGAAGC CGGCTTGTCC CACGACAATG CCGAACAAGT AGTGACCGAT
AGTGAGAAAC AGGCCCTGTT GGCCCATCTC AAGAGCAGTC ACGGCGACAA GGTCGAAGAG
CCGCGCAAGA TTACCTTGCA GCGCAAGACC ACCAGCACCC TGCGGGTGGC TGGTAGCAAG
ACCATCAGCG TTGAAGTGCG CAAGAAGAAG ACCTTCGTCA AGCGCAGCCC GGAGGAGCTC
GAGGCCGAGA AGCAGCGCGA GCTCGAGGCT CAGCGTGCCG AAGCCGAGGC CGAGCGCCTG
AAGGCCGAGG AAGAAGCCAA GCGCAAGGCT GAAGAAGAGG CCAAGCGTCA GGCTGCGGCC
GCTACGAGCG AGGCCCCGGC ACCGGCAGCT TCGCCGGCTC CATTGAGCGA GCCGGTGGTT
GCGGCGCCGG TCGTTGAAGT CGAGCGCAAG AAGGAAGAAG TGCGTCGCCC CGAGAAGGCG
CGCAGCGACG AAGACGAGCG TCGTGACCGC AAGCACGCGC AGCATCGCCC GACCCTCAAG
GAAAAGGCGC CGGCTCCGCG TGTCGCACCG CGCAGCGTCG ACGAAGAGAG CGACGGTTTC
CGTCGTGGCG GTCGCGGCAA GGCCAAGATG AAGAAGCGCA ACCAGCACGG CTTCCAGGCT
CCGGCCGGCC CGGTGGTGCG CGACGTGGCC ATTGGCGAAA CCATCACCGT GGCCGACTTG
GCCCAGCAGA TGTCGATCAA GGCCGCCGAA GTCATCAAGT TCATGTTCAA GATGGGCACC
CCGGTGACCA TCAACCAGGT GCTGGACCAG GAGACCGCTC AACTGGTCGC CGAAGAGTTC
GGTCACAAGG TCAAGCTGGT CAGCGACAAC GCGCTGGAAG AACAACTGGC CGAGTCGCTG
AAGTTCGAAG GCGAGGCCAT GTCCCGCGCG CCGGTGGTGA CCGTGATGGG TCACGTCGAC
CACGGTAAGA CCTCGCTGCT CGACTATATC CGTCGTGCCA AGGTGGCTTC CGGTGAGGCG
GGTGGCATCA CCCAGCACAT CGGCGCCTAC CACGTGGAAA CCGACCGCGG CATGGTCACC
TTCCTCGACA CCCCCGGTCA CGCCGCGTTC ACCGCGATGC GTGCCCGTGG TGCCAAGGCC
ACCGACATCG TCATTCTCGT CGTCGCAGCC GATGACGGCG TGATGCCGCA GACCCAGGAA
GCCGTACAGC ATGCGAAAGC AGCTGGCGTG CCGATCGTGG TTGCGGTGAA CAAGATGGAC
AAGCCGGAAG CCAACCCGGA CAACATCAAG AACGGCCTGG CCGCGCTGGA TGTGATTCCG
GAAGAGTGGG GCGGCGACGC ACCGTTCGTA CCGGTTTCCG CCAAGGCCGG TACCGGTATC
GACGAGCTGC TCGAAGCCGT GCTGCTGCAG GCCGAGGTTC TCGAGCTGAA AGCCACTCCG
ACCGCGCCTG GTCGTGGTGT GGTGGTCGAG TCGCGCCTGG ACAAGGGCCG TGGCCCGGTG
GCTACCGTGC TGGTTCAGGA CGGTACCCTG CGTCAGGGCG ACATGGTCCT GGTCGGCGTC
AACTACGGCC GCGTGCGTGC CATGCTCGAC GAGAACGGCA AGCCGATCAA GGAAGCCGGT
CCGTCGATTC CGGTCGAGAT CCTCGGCCTG GATGGCACGC CGGATGCCGG TGACGAGATG
ATGGTGGTGG CCGACGAGAA GAAGGCCCGC GAAGTCGCGC TGTTCCGTCA GGGCAAGTTC
CGCGAGGTCA AACTGGCTCG CGCCCACGCC GGCAAGCTGG AAAACATCTT CGAGAGCATG
GGCCAGGAAG AGAAGAAGAC CCTCAACATC GTCCTCAAGG CCGACGTGCG TGGTTCTCTG
GAAGCTCTGC AAGGCTCGCT CAGCACCCTG GGCAACGACG AAGTGCAGGT GCGTGTGGTC
GGTGGCGGCG TCGGTGGTAT CACCGAGTCC GATGCCAACC TGGCGCTGGC TTCCAATGCC
GTGCTGTTCG GCTTCAACGT CCGTGCTGAC GCCGGTGCGC GCAAGATCGT CGAGTCCGAA
GGCCTCGACA TGCGCTACTA CAACGTCATC TACGACATCA TCGAAGACGT CAAGAAGGCC
CTCACCGGTA TGCTCGGCAG CGATGTTCGC GAGAACATCC TGGGCACCGC GGAAGTGCGT
GACGTGTTCC GTTCGCCGAA GTTCGGCGCC GTCGCTGGCT GCATGGTCAT CGAGGGTACC
GTGTACCGCA ACCGTCCGAT CCGCGTGCTG CGCGAGGACG TGGTGATCTT CGAAGGCGAG
CTGGAATCGC TGCGTCGCTT CAAGGACGAC GTCGCCGAAG TGCGTAATGG CATGGAGTGC
GGTATCGGCG TGAAGAGCTA CAACGACGTC AAGGTCGGCG ACAAGATCGA AGTGTTCGAG
AAGGTCCAGG TGGCGCGCAG CCTGTAA
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| Protein sequence | MTQVTVKELA KVVDTPVERL LQQMREAGLS HDNAEQVVTD SEKQALLAHL KSSHGDKVEE
PRKITLQRKT TSTLRVAGSK TISVEVRKKK TFVKRSPEEL EAEKQRELEA QRAEAEAERL
KAEEEAKRKA EEEAKRQAAA ATSEAPAPAA SPAPLSEPVV AAPVVEVERK KEEVRRPEKA
RSDEDERRDR KHAQHRPTLK EKAPAPRVAP RSVDEESDGF RRGGRGKAKM KKRNQHGFQA
PAGPVVRDVA IGETITVADL AQQMSIKAAE VIKFMFKMGT PVTINQVLDQ ETAQLVAEEF
GHKVKLVSDN ALEEQLAESL KFEGEAMSRA PVVTVMGHVD HGKTSLLDYI RRAKVASGEA
GGITQHIGAY HVETDRGMVT FLDTPGHAAF TAMRARGAKA TDIVILVVAA DDGVMPQTQE
AVQHAKAAGV PIVVAVNKMD KPEANPDNIK NGLAALDVIP EEWGGDAPFV PVSAKAGTGI
DELLEAVLLQ AEVLELKATP TAPGRGVVVE SRLDKGRGPV ATVLVQDGTL RQGDMVLVGV
NYGRVRAMLD ENGKPIKEAG PSIPVEILGL DGTPDAGDEM MVVADEKKAR EVALFRQGKF
REVKLARAHA GKLENIFESM GQEEKKTLNI VLKADVRGSL EALQGSLSTL GNDEVQVRVV
GGGVGGITES DANLALASNA VLFGFNVRAD AGARKIVESE GLDMRYYNVI YDIIEDVKKA
LTGMLGSDVR ENILGTAEVR DVFRSPKFGA VAGCMVIEGT VYRNRPIRVL REDVVIFEGE
LESLRRFKDD VAEVRNGMEC GIGVKSYNDV KVGDKIEVFE KVQVARSL
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