Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3585 |
Symbol | |
ID | 5106132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 3952893 |
End bp | 3953339 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640504838 |
Product | TraR/DksA family transcriptional regulator |
Protein accession | YP_001189065 |
Protein GI | 146308600 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1734] DnaK suppressor protein |
TIGRFAM ID | [TIGR02420] RNA polymerase-binding protein DksA |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.845772 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACAA AAGAAAAAGC CAAAAGCACC AGCCAGCTGA TTCGTGGTTT CGAGCCTTAT CAAGAGAAGA AAGGCGAGGA ATACATGAGC GAGCCGATGC GCGCTCACTT CACCAGCATC CTCAACAAGT GGAAGCTGGA GCTGATGCAG GAAGTCGACC GTACCGTGCA CCACATGCAG GACGAAGCGG CCAACTTCCC CGATCCGGCC GACCGCGCCA GCCAGGAAGA AGAGTTCAGC CTGGAGCTGC GCGCCCGTGA TCGCGAGCGC AAGCTGATCA AGAAGATCGA CGAGACCCTG CAGCTGATCG AAGACAACGA GTACGGCTGG TGCGACTCCT GCGGCGTCGA AATCGGCATT CGCCGCCTCG AAGCCCGCCC GACCGCGACC CTGTGCATCG ACTGCAAGAC GCTGGCGGAA ATCAAGGAAA AGCAGATCGG TTCCTGA
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Protein sequence | MPTKEKAKST SQLIRGFEPY QEKKGEEYMS EPMRAHFTSI LNKWKLELMQ EVDRTVHHMQ DEAANFPDPA DRASQEEEFS LELRARDRER KLIKKIDETL QLIEDNEYGW CDSCGVEIGI RRLEARPTAT LCIDCKTLAE IKEKQIGS
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