Gene Pmen_3585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3585 
Symbol 
ID5106132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3952893 
End bp3953339 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content59% 
IMG OID640504838 
ProductTraR/DksA family transcriptional regulator 
Protein accessionYP_001189065 
Protein GI146308600 
COG category[T] Signal transduction mechanisms 
COG ID[COG1734] DnaK suppressor protein 
TIGRFAM ID[TIGR02420] RNA polymerase-binding protein DksA 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.845772 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACAA AAGAAAAAGC CAAAAGCACC AGCCAGCTGA TTCGTGGTTT CGAGCCTTAT 
CAAGAGAAGA AAGGCGAGGA ATACATGAGC GAGCCGATGC GCGCTCACTT CACCAGCATC
CTCAACAAGT GGAAGCTGGA GCTGATGCAG GAAGTCGACC GTACCGTGCA CCACATGCAG
GACGAAGCGG CCAACTTCCC CGATCCGGCC GACCGCGCCA GCCAGGAAGA AGAGTTCAGC
CTGGAGCTGC GCGCCCGTGA TCGCGAGCGC AAGCTGATCA AGAAGATCGA CGAGACCCTG
CAGCTGATCG AAGACAACGA GTACGGCTGG TGCGACTCCT GCGGCGTCGA AATCGGCATT
CGCCGCCTCG AAGCCCGCCC GACCGCGACC CTGTGCATCG ACTGCAAGAC GCTGGCGGAA
ATCAAGGAAA AGCAGATCGG TTCCTGA
 
Protein sequence
MPTKEKAKST SQLIRGFEPY QEKKGEEYMS EPMRAHFTSI LNKWKLELMQ EVDRTVHHMQ 
DEAANFPDPA DRASQEEEFS LELRARDRER KLIKKIDETL QLIEDNEYGW CDSCGVEIGI
RRLEARPTAT LCIDCKTLAE IKEKQIGS