| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3583 |
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| Symbol | |
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| ID | 5106130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3950757 |
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| End bp | 3951464 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640504836 |
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| Product | sugar fermentation stimulation protein A |
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| Protein accession | YP_001189063 |
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| Protein GI | 146308598 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1489] DNA-binding protein, stimulates sugar fermentation |
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| TIGRFAM ID | [TIGR00230] sugar fermentation stimulation protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.614042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.47728 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTTG ATCCGCCATT GGAAGAAGGC CGCCTGCTAC GCCGCTACAA GCGCTTTCTC
GCCGATATCG AGACCGCCAG CGGCGAGCCG ATGACCATTC ACTGCGCCAA CACCGGTTCG
ATGCTCAACT GCATGAGCGA GGGTTGTCGG GTGTGGTTCA GCCGCAGCAA CGATCCCAAG
CGCAAGCTGC CGGGCAGTTG GGAAATCAGC GAAACGCCGC AAGGGCGCCT GGCCTGCATC
AACACCGCGC GAGCCAATGC CCTGGTGGAA GAAGCGCTGC GCGCCGGGTT GATCGCCGAG
CTGGCCGGCT TCACCGCGCT CAAGCGCGAG GTGCCCTATG GGGTGGAGAA CAGCCGCGCC
GATTTTCGCC TGGATTATCC GAGCGGGCCG GTCTTTGTCG AGGTCAAGAG CGTGACGCTG
GGCTTCGACG ACAGTGACGT GGCGGCCTTT CCCGATGCGG TGACGCTGCG TGGCGCCCGG
CACCTGCGCG AGCTGGCCGC CCTGTCGCGC CTCGGTGTAC GTACCGTGCT GCTGTACTGC
GTGAATCTGT CGGGCATCGT CGCCGTGCGG GCTGCGGAGG ACATCGATCC GGCCTACGCC
GCCGGTCTGC GCGAAGCCAG AGCGGCGGGT GTGGAAGTGC TGGCCTACGG CGCCGAGCTC
AGCCCTGAGG GTATCTCGCT GGTTCGCCGG CTGGATGTAC TGACCTAG
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| Protein sequence | MRFDPPLEEG RLLRRYKRFL ADIETASGEP MTIHCANTGS MLNCMSEGCR VWFSRSNDPK
RKLPGSWEIS ETPQGRLACI NTARANALVE EALRAGLIAE LAGFTALKRE VPYGVENSRA
DFRLDYPSGP VFVEVKSVTL GFDDSDVAAF PDAVTLRGAR HLRELAALSR LGVRTVLLYC
VNLSGIVAVR AAEDIDPAYA AGLREARAAG VEVLAYGAEL SPEGISLVRR LDVLT
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