Gene Pmen_3552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3552 
Symbol 
ID5106099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3918183 
End bp3919118 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content67% 
IMG OID640504805 
Productglutathione S-transferase-like protein 
Protein accessionYP_001189032 
Protein GI146308567 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.872782 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.141986 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGAAC TGATCCTGCA CCACTACGAC GCCTCGCCCT TTGCCGAGAA GGCCCGCCTG 
ATGCTGGGCT TCAAGCAGCT CTCGTGGCGC TCGGTGGAGA TCCCGCGGAT CATGCCCAAG
CCCGATCTGA CCGCACTGAC AGGCGGCTAC CGCAAGACTC CGGTACTGCA GGTGGGCGCC
GACATCTATT GCGACACCGC GCTGATCGCT CGTCGCCTGG AGGCGGAGAA GGCTACCCCG
ACACTGCTGC CCGAAGGCCA GGAGTTCAAT ACCAGTCTGC TGGCGCAATG GGCCGATTCG
GTGCTGTTCC AGCATGCCGT GGCCCTGGTA TTCCAGCCGC AGTCCATCGC CGTGCGCATG
GGGCGGCTGC CGGCGGCGGC GCAGCAGGCC TTTATCGCCG ATCGCAGCGC CCTGTTTTCC
GGCGGTAGCG CCAGCCGCGT GCCGCTGGAG CAGGCCAAGC ACAACTGGCC GGCGCTGATG
GGGCGTCTGC AGCAGCAGTT GCAGCGCGAG GACGGCGACT TTCTGTTCGG CGAGCCGTCG
CTGGCCGATT TTTCGGTCGC GCACTGCCTG TGGTTCCTGC GCGGCACGCC GGTGACCGCG
CCGCTGGTCG ACGACTACCC GGAGGTATCC GCCTGGCTCG CCCGGGTACT GGGCTTCGGC
CACGGCTCGT TCAGCGAGAT GAGCAGCGAG CAGGCCCTCG CGGTGGCGCG TGAGGCGACG
CCGGCGGCGC TGCCGGAGGA AGAATTCATC GAGCCCAACG GTTTCCAGGT TGGCCAGTCG
GTAACCATCG CCGCAGTCGA TTACGGCGTC GACCCGGTAC AGGGCGAGTT GCTGTTCGCC
GGCCGCGAGG AATTGATCCT GCGCCGTGAG GACGAACGGG CCGGTGTGCT GCACGTGCAC
TTCCCGCGCC TGGGCTTTCG CATCGAGGCG CGCTGA
 
Protein sequence
MHELILHHYD ASPFAEKARL MLGFKQLSWR SVEIPRIMPK PDLTALTGGY RKTPVLQVGA 
DIYCDTALIA RRLEAEKATP TLLPEGQEFN TSLLAQWADS VLFQHAVALV FQPQSIAVRM
GRLPAAAQQA FIADRSALFS GGSASRVPLE QAKHNWPALM GRLQQQLQRE DGDFLFGEPS
LADFSVAHCL WFLRGTPVTA PLVDDYPEVS AWLARVLGFG HGSFSEMSSE QALAVAREAT
PAALPEEEFI EPNGFQVGQS VTIAAVDYGV DPVQGELLFA GREELILRRE DERAGVLHVH
FPRLGFRIEA R