| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3548 |
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| Symbol | |
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| ID | 5106095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3913996 |
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| End bp | 3915663 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640504801 |
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| Product | aminopeptidase Y |
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| Protein accession | YP_001189028 |
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| Protein GI | 146308563 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2234] Predicted aminopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.0650469 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGCCAC AAGCGTTGCC GCCTTTCTCG ATCTCCAGAT ATGGATTGGA GGATTACATG
CGCAACAAGA CCAATAATCG CCGTCTACTG GGCGCCGCCT TGCTGGCGGC CATTTCCGGG
CAGGCCACTG CGGCCAAGGG GCTCGATGTC ACCGAACTGT TCGATCAGTT CTGGAGCCCG
ACCCGGCTCG GGCCGGCGGA GTGCCGTTCC GGTGTGCTGA GTGCCACGCC GCTGTTGCTA
CCGCGCTGCA TGCAGGCGGC CAACAGCATG ACCCACCTGC AGATGTTCAA CGACATCGCC
CTGGCCAACG GTGGCAACCG TGCCGCCGGC CTGTCCGGTT ACGAGCGCTC GCTCGACTAT
GTGCAGGCGA CGCTGGAAAG CGCCGGCTAC AAGGTCACCC GTCAAGCCTT CCCGTTCAGC
GCGTTCTACC CGCAGGGGCC CGGCGTGCTG CAGAGCCTGG CGCCGACCCC GGCGCAGTTC
GAGTGGGAGG TGGACTTCAC CTACCTGTCG CAGACCGATG CCGGCGATGT CAGTGCACCG
GTGGCAGCGG TGGACATCGC CCTGGGCGAG GGCAACCAGT CCAGCAGCGG CTGCGAGGCC
GAGGATTTCG CCGCTTTCCC GGCTGGCTCC ATCGCCCTGC TGCAGCGCGG CACCTGCAAC
TTCCAGATCA AGGCCGAGAA CGCTGCCGCC GCTGGCGCCG TGGGCGTGGT GATCTTCAAC
CAGGGCGACA GCGAGGACCG CAAGGGCCTG CTCAACGCCA CCCTGGGCGA TGCCTATTCC
GGTGGCATTC CGGTGCTGTT CACCACCTAT GACGTGGGCG TGAGCCTGGC GCAGACGGCC
GAGCAGCAGG TGCGCATGGT CACCGACGTG GTGCGCGAAC GGACCCAGAC CCACAACCTA
GTGGCCGAGA GCAAGCGCGG CAACGCGGGC AACGTGGTGA TGCTCGGCGC GCATCTGGAT
TCGGTGTTCG AGGGGGCCGG CATCAACGAC AACGGTTCGG GCAGCGCCGC GCTGCTGGAG
CTGGCTGTGC AGATGGCCAA GGCCAAGCCG AAGAACAAGC TGCGTTTCGC CTGGTGGGGC
GCCGAGGAGT CGGGGCTGGT GGGCTCGACC TACTACGTCA ACCAGCTGCC TGACGAGGAG
AAGGCGAAGA TCAAGGCGTA CCTGAACTTC GACATGATCG CCTCGCCGAA CTTCGCCTAC
TTCATCTATG ACGGCGACGG TTCGGACTTC GGCCTGCAGG GCCCGCCCGG CTCGGCCGCG
CTCGAGCGTC TGTTCGGCGA GTATTACCGC CTGCGCGGTC TGCCGTTCGA GGGTGACGAG
ATCAGCTTCC GTTCCGACTA TGCGCAGTTC TTCCTCGATG GCATCGCCTT CGGCGGACTG
TTCACCGGGG CCGAGGTGGT CAAGTCCGAA GAGCAGGCCA GCCGTTATGG CGGCACTGCG
GGCGAAGCCT TCGATCCGTG CTACCACGAG GCCTGCGATG ACCTGAACAA CGTCGATCTG
CGCGCGCTGG AGGTCAACGG CGATGCCATG GCCTTCGTCG CCAGCTGGCT GTCGCTGTCG
ACCAAGATCG TCGATGACGA GATCGCCGCG TCCAGGGATT CGCGCATGAT GATGCGCAGC
GCCCAGGCTT ACGACATCAC TCATTGGGGC AAGCACTGGG TCAAATAG
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| Protein sequence | MAPQALPPFS ISRYGLEDYM RNKTNNRRLL GAALLAAISG QATAAKGLDV TELFDQFWSP
TRLGPAECRS GVLSATPLLL PRCMQAANSM THLQMFNDIA LANGGNRAAG LSGYERSLDY
VQATLESAGY KVTRQAFPFS AFYPQGPGVL QSLAPTPAQF EWEVDFTYLS QTDAGDVSAP
VAAVDIALGE GNQSSSGCEA EDFAAFPAGS IALLQRGTCN FQIKAENAAA AGAVGVVIFN
QGDSEDRKGL LNATLGDAYS GGIPVLFTTY DVGVSLAQTA EQQVRMVTDV VRERTQTHNL
VAESKRGNAG NVVMLGAHLD SVFEGAGIND NGSGSAALLE LAVQMAKAKP KNKLRFAWWG
AEESGLVGST YYVNQLPDEE KAKIKAYLNF DMIASPNFAY FIYDGDGSDF GLQGPPGSAA
LERLFGEYYR LRGLPFEGDE ISFRSDYAQF FLDGIAFGGL FTGAEVVKSE EQASRYGGTA
GEAFDPCYHE ACDDLNNVDL RALEVNGDAM AFVASWLSLS TKIVDDEIAA SRDSRMMMRS
AQAYDITHWG KHWVK
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