| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3544 |
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| Symbol | |
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| ID | 5106091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3909122 |
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| End bp | 3910468 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640504797 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001189024 |
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| Protein GI | 146308559 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.121103 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCGC AGGCCTCATC GCGGGCCGGC CTGTCGGTCG TCGACGGCGT GGCCATGCTC
GCCGGCGTGG TGATCGGGGT GGGCATCTTC GGCCTGCCGC CCCTGGTCGC CCAGCATGCC
AGCAGCGCCG AACTGTATCT GGCGCTGTGG CTGGCCGGAG GCCTGGTCAT GCTGATCGGC
GCGCTGTGCT ACGGCGAGCT GGGCGCCGCG CACCCGGATC AGGGCGGCGA ATACCACTAT
CTGAATCTGG CCTGGGGGCC GCAGGTCGGC CTGCTGTTCG CCTGGGCGCG CGGCACGGTG
ATCCAGACCG GCGCCATCGC CGTGGTCGCC TTCATCTATG GCGACTATGC CCAGCGCCTG
CTGCCCCTCG GGCCGTACGG CAGCGCCTGG CATGCCGCCT CGGTGGTGGT GGCGCTGACC
CTGCTCAACC TGCTCGGCAC CCGTGAATCG CGCCGCGCCC AGGTGTTCTT CAGCGCGGCC
ACGGTGGCGT CGATCCTGCT GGTGATACTG GCCGGCCTGG CCCTGGCCGA GCCACAGCAG
GCAGCGGCCG CGCCGCCGCA GGCGAGCGGC AGTACGGCGG CCATGCTCGG CATGGGCATG
GTGTTCGTGC TGCTCACCTA TGGCGGCTGG AACGAGGCGG CCTACCTCTC CGGCGAACTG
CGCAATCCGG CGCGCAACAT GAGCCGCGTG CTGCTGATCG GCACGGCGCT GGTGACCGCC
CTGTACCTGC TGGCGAACCT GGTGTTCCTC GATATCTTCG GCCTCGACGG CCTGCGTCAG
ACCGATGCGG TTGCCGCCGA CCTGATGCAC ATGGTCGCCG GGCCGCGGGC CGAGGCCATG
CTCGCGCTGT TCGTCTGCCT GACTGCCCTG AGCACGCTCA ACGCCACCAT CTTCACCGGC
TCGCGGGTGT ACTACGCGCT GGGCCGCGAT GTACCGCAGC TGGCCTTTCT CGGTCGCTGG
AACGAGCGCG GCGCCACGCC TCTGCGCGCG CTGCTGCTGC AATGCGCGAT CACCCTGCCG
CTGATTCTGT TCGGCGCGCT GAGCGAGAAC GGCGTGCAGA CCATGGTGGC CTACACCGCG
CCGGTGTTCT GGCTGTTCAT GTCGCTCACC GCCCTGGCGC TGATCCGCCT GCGCCGCAGC
CAGCCCTGGG TACGGCGCCC GTTCAGCGTG CCGCTGTATC CCCTGACGCC GATCCTGTTC
GCCCTGACCT GCCTGGGCCT GTTCTATTCC AGCGCCCTGT ATGCCGGCAG CGGCGCGCTG
CTCGGCCTGC TGGTGCTGGC GGCCGGAGCA CCGCTGCTGC TGTTGCAGCG CACGGCCCTG
CAGGAGCAGC CCGACACGGC GGAGTGA
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| Protein sequence | MTAQASSRAG LSVVDGVAML AGVVIGVGIF GLPPLVAQHA SSAELYLALW LAGGLVMLIG
ALCYGELGAA HPDQGGEYHY LNLAWGPQVG LLFAWARGTV IQTGAIAVVA FIYGDYAQRL
LPLGPYGSAW HAASVVVALT LLNLLGTRES RRAQVFFSAA TVASILLVIL AGLALAEPQQ
AAAAPPQASG STAAMLGMGM VFVLLTYGGW NEAAYLSGEL RNPARNMSRV LLIGTALVTA
LYLLANLVFL DIFGLDGLRQ TDAVAADLMH MVAGPRAEAM LALFVCLTAL STLNATIFTG
SRVYYALGRD VPQLAFLGRW NERGATPLRA LLLQCAITLP LILFGALSEN GVQTMVAYTA
PVFWLFMSLT ALALIRLRRS QPWVRRPFSV PLYPLTPILF ALTCLGLFYS SALYAGSGAL
LGLLVLAAGA PLLLLQRTAL QEQPDTAE
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