| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3536 |
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| Symbol | |
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| ID | 5106004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3898136 |
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| End bp | 3899380 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640504789 |
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| Product | citrate transporter |
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| Protein accession | YP_001189016 |
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| Protein GI | 146308551 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.164085 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTTCG CTTCCTGGCT GACCATCGGC CTGTTCGTTA TCACCTATGT GGGCATGGCG
GCCGGCGGTA TTCGCGGCCT GCGCATCGAC CGCAGCTGGA TCGCCTGCAG CGCGGCGGTA
CTGCTGCTGG TCAGCGGCGC GCTGAGCATG CAGGACGCCG CCCATCACCT CGATCCCGGT
GCGCTGTTGC TGCTGCTGGC GCTGATGCTG ATTTCCGCCC AGTTCGATTT CTCCGGCGTC
TACGCCTGGC TCAACGAATA CCTGACCCAT CATGCCGAGC GCCCGGCCGT GCTGCTGGCC
GGCGTGGTGC TGCTGGGCGG CCTGCTGTCG GCCATTCTGG TCAACGATAT CGTCGCCTTC
GCCCTGACCC CGCTGCTGTG CCGCAGCCTG CAGCTACGCG GCCTTGATGC CCGACCGTTT
CTGCTGGCGC TGGCGTTGTC CTGCAATGCC GGCTCGGCGG CCAGCCTGAT CGGCAATCCG
CAGAACATTC TGATCGGCCA GGCCGGCGGG CTGGATTTCT GGGGTTATGT CGCCGTGGCC
GGGATGCCTG CGCTGGCGGC GATGGCCATC GTCTATGCGG TGATCTGGCT GCAGTGGCGA
CATCGCTGGG GCGAGCCCAG GCCACTGCCA GCGGATGACA TGCCGGTGGA GCGCATCTAC
GGCGCGCACA GCTATCTGAA ACCGCTGGCG GCCAGCCTGG CGCTGCTGGC GCTGTTCGCC
ACGGCACTGC CGCGCGAGTT GTCGGCGCTG CTGATCGCGG TGCTGGTGAT GGTGTCGCGG
CGGGTGGACA GCCGCGACTA CGTGAACAAG GTGGACTGGA ACCTGCTGCT GCTGTTCGTC
GGCCTGTTTC TGGTCAGTGG CGCCGCGCTG CAGTTGCCGC AGCTGGCGCA GGGCGCGGCG
TGGCTGGCCG AGCATGGGCT GTTGCCGCAG GGCGTGATGT CGCTGGCGAC CTCGTCGCTG
CTGGCGAGCA ACCTGATCGG CAACGTGCCC TTCGTGGTGC TGCTGCTGGG GCTGATGCCG
GAGCTGTCGC ACGGCGTGCT GATCGGTCTG GCGGTGATGT CGACGCTGGC CGGCAACCTG
CTGCTGATCG GTAGCGTGGT CAACCTGATC GTCGCCGAAG GGGCGAAGCG CCAGGGCGTG
CGCATCGGCT TCGTCGACTA TGCACGCAGC GGCGTGCCGG TGACGCTGCT GAGCATGACG
CTGGCAGGGC TCTGGCTGGG CCTGGGCGGC TGGCTGCCCT GGTAG
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| Protein sequence | MTFASWLTIG LFVITYVGMA AGGIRGLRID RSWIACSAAV LLLVSGALSM QDAAHHLDPG
ALLLLLALML ISAQFDFSGV YAWLNEYLTH HAERPAVLLA GVVLLGGLLS AILVNDIVAF
ALTPLLCRSL QLRGLDARPF LLALALSCNA GSAASLIGNP QNILIGQAGG LDFWGYVAVA
GMPALAAMAI VYAVIWLQWR HRWGEPRPLP ADDMPVERIY GAHSYLKPLA ASLALLALFA
TALPRELSAL LIAVLVMVSR RVDSRDYVNK VDWNLLLLFV GLFLVSGAAL QLPQLAQGAA
WLAEHGLLPQ GVMSLATSSL LASNLIGNVP FVVLLLGLMP ELSHGVLIGL AVMSTLAGNL
LLIGSVVNLI VAEGAKRQGV RIGFVDYARS GVPVTLLSMT LAGLWLGLGG WLPW
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