| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3531 |
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| Symbol | |
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| ID | 5105999 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3891504 |
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| End bp | 3892937 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640504784 |
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| Product | Na+/H+ antiporter NhaC |
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| Protein accession | YP_001189011 |
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| Protein GI | 146308546 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1757] Na+/H+ antiporter |
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| TIGRFAM ID | [TIGR00931] Na+/H+ antiporter NhaC |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.0661235 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCCC GCTCCCCTTC CCTACTCGAC GCGCTGCTGC CCATTGGCGT GCTCGTCGTG
CTGCTCGGCC TTTCCGTCTA CCTGTTCGGC GACGGCTCCT CCAGCGGACC GAACCAGATC
GCGCTGATGA GCGCCGCCTT CGTCGCCGGC CTGGTCGGAC TGAAAAACGG CCTGCGCTGG
GCCGATATCG AGGAAGGCAT ACTCGCCGGC ATCCATATGG CGATGAAGGC CAACCTGATC
CTGCTGGCGG TCGGCGCCCT GATCGGCACC TGGATTCTCG CCGGTACCGT GCCGACCATG
ATCTGGCTGG GCCTGAAGCT GATCAGCGCC GAGTACTTCT ACGTCACCAG CTGCCTGATC
TGCGCGCTCA CCGCGCTGTC CATCGGCAGC TCCTGGACGG TGGCCGGCAC CCTCGGCATC
GGCCTGATGG GCGTGGCCGC GGGCCTGGGG CTGGATCCAG CGATCACCGC CGGGGCGATC
ATTTCCGGCG CCTACTTCGG CGACAAGCTG TCGCCGCTGT CGGACACTAC CAACCTGGCC
CCGGCCGCCG CCGGCGCCGA TCTGTTCGCG CACATCCGCA ACATGCTGCG TACCACCACG
CCGGCGCTGC TGATCGCCCT GGCGATCTTC TTCGTGCTCG GCCAGCAGGT CGGCGCCAGC
CACGACACCG GGCGTATCGC CGAGGTGCTG GCGGCGCTGG AGGCGCAGTT CCGCCTGGGC
TGGCATCTGC TGCTGCCGGT GGCCTTCCTG CTGTTTCTTG CCATGCGCCA GTGGGCGGCC
TTTCCGGCGG TGTTTCTCGC CGCGCTGCTC GGCGCGGTGT TCGCCCTGGT GTTTCAGCCG
GAGGTGATGA GCCGCCTGGC CGATCCGGCG GCCGGCGTCC TGGCGCCGCT GAAAACGGTG
TGGAGCGCGC TGTTCGCCGG CTACGAGTCA GCCAGCGGCA ATGCCGAGCT GGACGGTCTG
CTGTCCAAGG GCGGCATGGG CAGCATGCTC ACCACCGTGT GGCTGATCAT CTGCGCCATG
TGCTTCGGCG GCGTGCTGGA GCGCCTGGGC CTGCTGCAAC GCCTGCTGCA GAGCGCGTTG
CGCCTGGTGC GCAGCGACAG CGGCCTGGTT GCCAGCACCA TCACCACCAG CATCGGCACC
AATGTCATCA CCGCCGACCA GTACATCGCC CTGGTGCTGC CGGGACGCAT GTACCGCGCC
GAGTACGAGA AACGCAGCCT GGCGCCGACC AGCCTGTCGC GCGCCCTGGA AGACGGCGGC
ACCCTGACTT CGGTGCTGGT GCCCTGGAAC ACCTGCGGCG CCTACATGGC CGCCACCCTC
GGCGTGGCCA CCCTGAGCTA CCTGCCGTAC TGCTTCTTCA ACCTGATCAT GCCGGTGCTG
GCCATCGTCC TGGCCTACGT GCTGCCGCCC AAGCGCCAGG CGCAGGAAGT CTGA
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| Protein sequence | MTARSPSLLD ALLPIGVLVV LLGLSVYLFG DGSSSGPNQI ALMSAAFVAG LVGLKNGLRW
ADIEEGILAG IHMAMKANLI LLAVGALIGT WILAGTVPTM IWLGLKLISA EYFYVTSCLI
CALTALSIGS SWTVAGTLGI GLMGVAAGLG LDPAITAGAI ISGAYFGDKL SPLSDTTNLA
PAAAGADLFA HIRNMLRTTT PALLIALAIF FVLGQQVGAS HDTGRIAEVL AALEAQFRLG
WHLLLPVAFL LFLAMRQWAA FPAVFLAALL GAVFALVFQP EVMSRLADPA AGVLAPLKTV
WSALFAGYES ASGNAELDGL LSKGGMGSML TTVWLIICAM CFGGVLERLG LLQRLLQSAL
RLVRSDSGLV ASTITTSIGT NVITADQYIA LVLPGRMYRA EYEKRSLAPT SLSRALEDGG
TLTSVLVPWN TCGAYMAATL GVATLSYLPY CFFNLIMPVL AIVLAYVLPP KRQAQEV
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