Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3528 |
Symbol | |
ID | 5105996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 3887483 |
End bp | 3887902 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640504781 |
Product | DNA polymerase III, chi subunit |
Protein accession | YP_001189008 |
Protein GI | 146308543 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2927] DNA polymerase III, chi subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0021621 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.458218 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAGAA TCGAGTTCTA CGTTCTCTCC TCCAGCGACG CCGAAGGTCG CCTGCGCGCG GCCTGCCAAC TGGCGCTCAA GGCCTGGGGC GCCGGCCTGC CGGTGTTCGT CCGGGGCAGC GACGAGGCGC AGTGCATCGA GCTCGACGAA CTGCTGTGGC GCTTCAAGGC CGAGCGCTTC GTGCCCCACG ACCTGCACCG CGACGCGCCG CAGGCACCGG TGGTACTGGG CGTGGACGAA GTGCCGAGCC ACGAGCAAGG CGTGCTGATC AACCTTGGCA GCAGCCTGTC TCCGCATGTC GAACGCTTCT CCCGCATCAT CGAGATCGTC AACCAGCAGC CGGAACTGCT GAGCGCCTGT CGCGAGAATT TCCGTAACTA TCGCCAGCGC GGGTATGATC CCAAACGCGT CGAACTTTAA
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Protein sequence | MPRIEFYVLS SSDAEGRLRA ACQLALKAWG AGLPVFVRGS DEAQCIELDE LLWRFKAERF VPHDLHRDAP QAPVVLGVDE VPSHEQGVLI NLGSSLSPHV ERFSRIIEIV NQQPELLSAC RENFRNYRQR GYDPKRVEL
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