| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3525 |
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| Symbol | |
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| ID | 5105993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3883566 |
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| End bp | 3884630 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640504778 |
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| Product | permease YjgP/YjgQ family protein |
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| Protein accession | YP_001189005 |
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| Protein GI | 146308540 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0795] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.246904 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAGC TCGATCGCTA CATCGGTGCC CAGGTCTTCT TCGCCATCCT CACGGTGCTG
GGCATCATCC TGGGCCTGGC CCTGCTGTTC GCCTTCATCG ACGAGCTGAG CGACCTGAAC
AAGGGCGACT ATGGCCTCGG CCAGGCGCTC TGGTACGTGC TGTTGACCGC ACCGCGCCGC
GCCTACGAGA TGTTGCCGAT GGCGGCGCTG ATCGGCTGCC TGATCGGTCT CGGCACCCTG
GCCAGCAACA GCGAACTGAC CATCATGCGC GCCGCGGGCG TGTCCATCGG TCGTATCGTC
TGGGCGGTGA TGAAACCCAT GCTGGTGCTG ATGCTGGCCG GCATCCTGAT CGGCGAGTAC
GTTGCGCCGC TGACCGAGAA CCAGGCCCAG GCCGACCGGG CCCTGGCCCA GGGCGGTGGC
GCGGCGCAGA GTTCCAAGCG TGGCATGTGG CACCGTCAGG GGCAGGAATA CGTGCATATC
AACGCCGTGC AGCCGGGTGG CCTGCTGCTC GGGGTGACGC GCTATCGTTT CGATGATGAG
CGTCGTCTGC AGTCGGCCAG TTTCGCCCGT CGTGCCGAGC ACAGGGGCGA TCACTGGGTG
CTGCGCAACG TGCAGACCAC CTTCCTGCAC GACAATCGCT CGGAAGTGGT CAATCAGCGT
GAAGAGCGTT GGGATATCGA GCTTAGCCCG CAACTGCTCA GCACCGTGGT GATGGAGCCC
GAGTCGCTGT CGATCACCGG TCTGTGGCAG TACATCCATT ATCTGGCCGA GCAGGGGCTG
AACAACGCCC GTTACTGGCT GGCGTTCTGG ACCAAGGTAC TGCAGCCGCT GGTGACGGGG
GCGCTGGTGC TGATGGCGAT TTCCTTCATT TTCGGCCCGC TGCGTTCGGT GACCCTGGGC
CAGCGCGTGT TCACCGGCGT GCTGGTGGGC TTCATCTTCC GTATCGCCCA GGACCTGCTC
GGGCCGTCGA GCCTGGTGTT CGGCTTCTCG CCGCTGCTGG CCGTGCTGGT GCCGGCGGGC
ATCTGTGCAC TGGCCGGAGT CTGGTTACTG CGCAGGGCGG GCTGA
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| Protein sequence | MAKLDRYIGA QVFFAILTVL GIILGLALLF AFIDELSDLN KGDYGLGQAL WYVLLTAPRR
AYEMLPMAAL IGCLIGLGTL ASNSELTIMR AAGVSIGRIV WAVMKPMLVL MLAGILIGEY
VAPLTENQAQ ADRALAQGGG AAQSSKRGMW HRQGQEYVHI NAVQPGGLLL GVTRYRFDDE
RRLQSASFAR RAEHRGDHWV LRNVQTTFLH DNRSEVVNQR EERWDIELSP QLLSTVVMEP
ESLSITGLWQ YIHYLAEQGL NNARYWLAFW TKVLQPLVTG ALVLMAISFI FGPLRSVTLG
QRVFTGVLVG FIFRIAQDLL GPSSLVFGFS PLLAVLVPAG ICALAGVWLL RRAG
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