Gene Pmen_3519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3519 
SymbolyajC 
ID5105987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3878683 
End bp3879012 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content61% 
IMG OID640504771 
Productpreprotein translocase subunit YajC 
Protein accessionYP_001188999 
Protein GI146308534 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0958686 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.24263 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTTT TCATTCCCGC CGCCTACGCT GACACTGCGG CTGCTGGCCC TGCCGGCAGC 
GGTTTCGAGT GGGTATTCCT GATCGGTTTC CTGGTCATTT TCTACCTGAT GATCTGGCGT
CCGCAGGCCA AGCGCGCCAA GGAACACAAG AACCTGCTCA GCAGCCTGCA GAAGGGTGAT
GAGGTGGTGA CCAGCGGCGG CATCGCCGGC AAGGTCTCCA AGGTTGCCGA CGACTTCGTG
GTGATCGAGG TGTCCGACAC CGTCGAGCTG AAGTTCCAGA AGCAGGCCAT CGCCGCCACC
CTGCCCAAGG GCACGCTGAA AGCCATCTGA
 
Protein sequence
MSFFIPAAYA DTAAAGPAGS GFEWVFLIGF LVIFYLMIWR PQAKRAKEHK NLLSSLQKGD 
EVVTSGGIAG KVSKVADDFV VIEVSDTVEL KFQKQAIAAT LPKGTLKAI