Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3519 |
Symbol | yajC |
ID | 5105987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 3878683 |
End bp | 3879012 |
Gene Length | 330 bp |
Protein Length | 109 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640504771 |
Product | preprotein translocase subunit YajC |
Protein accession | YP_001188999 |
Protein GI | 146308534 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1862] Preprotein translocase subunit YajC |
TIGRFAM ID | [TIGR00739] preprotein translocase, YajC subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0958686 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.24263 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCTTTT TCATTCCCGC CGCCTACGCT GACACTGCGG CTGCTGGCCC TGCCGGCAGC GGTTTCGAGT GGGTATTCCT GATCGGTTTC CTGGTCATTT TCTACCTGAT GATCTGGCGT CCGCAGGCCA AGCGCGCCAA GGAACACAAG AACCTGCTCA GCAGCCTGCA GAAGGGTGAT GAGGTGGTGA CCAGCGGCGG CATCGCCGGC AAGGTCTCCA AGGTTGCCGA CGACTTCGTG GTGATCGAGG TGTCCGACAC CGTCGAGCTG AAGTTCCAGA AGCAGGCCAT CGCCGCCACC CTGCCCAAGG GCACGCTGAA AGCCATCTGA
|
Protein sequence | MSFFIPAAYA DTAAAGPAGS GFEWVFLIGF LVIFYLMIWR PQAKRAKEHK NLLSSLQKGD EVVTSGGIAG KVSKVADDFV VIEVSDTVEL KFQKQAIAAT LPKGTLKAI
|
| |