Gene Pmen_3515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3515 
Symbol 
ID5105983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3874206 
End bp3875021 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content66% 
IMG OID640504767 
Productinositol-phosphate phosphatase 
Protein accessionYP_001188995 
Protein GI146308530 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0483] Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.588619 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCCA TGCTGAATAT CGCCCTGCGC GCCGCTCGCA GCGCCGGTGA AATGATCTTT 
CGCTCCATCG AGCGCCTGGA TGTCATCTCG GTCGACGAGA AGGATGCCAA GGATTACGTC
ACCGAGGTCG ACAAGGCCGC CGAGCTGATG ATCGTCCAGG CCATCCGCAA GGCCTATCCG
ACCCACAGCT TTCTGGGTGA AGAAGGCGGC GTGCTGGAAG GTAGCGGCGA CGGCGCCGAT
TACCAGTGGA TCATCGACCC GCTGGACGGC ACCACCAACT TCGTCCGCGG CGTACCGCAT
TTCGCCATCA GCATCGCCTG CAAGTACCGC GGCCGCCTCG AGCACGCCAT CGTCCTCGAC
CCGGTGCGCC AGGAAGAGTT CACCGCCAGC CGCGGCCGCG GCGCAGCCCT CAACGGTCGC
CGCCTGCGCG TGAGCAATCG CAAGAGCCTC GAAGGCGCCC TGCTCGGCAC CGGGTTCCCG
TTCCGCGACG GCCAGCTCGA CCACCTGGAC AACTACCTGA ACATGTTCCG CAGCCTGACC
GGCCAGACTG CCGGCATCCG CCGCGCAGGC GCTGCGAGCC TGGATCTGGC CTACGTCGCG
GCCGGCCGCT TCGATGCATT CTGGGAATTC GGCCTGTCCG AGTGGGACAT GGCCGCAGGC
GCACTGCTGA TCCAGGAAGC AGGCGGCCTG GTCAGCGACT TCAGCGGCGG TCATGAATTC
CTCGAGAAGG GCCAGATCGT CGCCGGCAAC ACCAAGTGCT TCAAGGCCGT GCTGACCGCG
ATTCAGCCGC ACCTGGCACC GTCGATGAAG CGCTGA
 
Protein sequence
MQPMLNIALR AARSAGEMIF RSIERLDVIS VDEKDAKDYV TEVDKAAELM IVQAIRKAYP 
THSFLGEEGG VLEGSGDGAD YQWIIDPLDG TTNFVRGVPH FAISIACKYR GRLEHAIVLD
PVRQEEFTAS RGRGAALNGR RLRVSNRKSL EGALLGTGFP FRDGQLDHLD NYLNMFRSLT
GQTAGIRRAG AASLDLAYVA AGRFDAFWEF GLSEWDMAAG ALLIQEAGGL VSDFSGGHEF
LEKGQIVAGN TKCFKAVLTA IQPHLAPSMK R