Gene Pmen_3507 details

Gene Information

• Locus tag: Pmen_3507
• Symbol: hscA
• ID: 5105975
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas mendocina ymp
• Kingdom: Bacteria
• Replicon accession: NC_009439
• Strand: -
• Start bp: 3867415
• End bp: 3869280
• Gene Length: 1866 bp
• Protein Length: 621 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 640504759
• Product: chaperone protein HscA
• Protein accession: YP_001188987
• Protein GI: 146308522
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR01991] Fe-S protein assembly chaperone HscA

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 42
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCCTTAT TGCAGATCGC CGAGCCTGGG CAGAGCCCGC AACCGCACCA GCGTCGGCTG 
GCGGTGGGAA TCGACCTGGG TACCACCAAT TCGCTGGTGG CCGCTGTGCG CAGCGGCCTG 
GCCGAACCCC TGGCCGATGG CGATGGCAAG GTCATCCTGC CGTCGGCCGT GCGCTATCAC 
CCGCAGCACG TGGAAGTTGG CGAGTCGGCC AAGCTGGCGG CGGCCAGCGA TCCGTTCAAC 
ACCGTGCTGT CGGTCAAGCG CCTGATGGGC CGTGGTATCG CCGACGTGCA TCAGCTGGGC 
GAGCAACTGC CCTATCGCTT CGCCGCGGGC GAGTCGCATA TGCCGTTCAT CGAGACCGTG 
CAGGGGGCGA AGAGCCCGGT CGAGGTCTCG GCGGAAATTC TCAAGACGCT GCGTCTGCGT 
GCCGAGCAGA CCCTAGGCGG CGAGCTGGTC GGGGCGGTGA TTACCGTGCC GGCCTATTTC 
GATGACGCCC AGCGCCAGGC CACCAAGGAT GCCGCACGGT TGGCCGGGCT CAATGTATTG 
CGCCTGCTCA ACGAGCCAAC CGCTGCCGCT GTGGCCTATG GCCTGGATCA GAAGGCCGAG 
GGTGTGGTCG CGATCTACGA TCTGGGTGGC GGTACCTTCG ATATCTCCAT CCTGCGCCTG 
ACCGGTGGCG TGTTCGAAGT GCTGGCCACC GGTGGCGACA GTGCGCTGGG TGGTGATGAC 
TTCGATCATG CCATTGCCGA CTGGATCATC CAGCAAGCCG GCATTTCCAG CGATCTCGAT 
CCGTCGGCGC AGCGCAGTCT GTTGCAGGCC GCTTGTGCGG CCAAGGAAGG GTTGACGAAT 
GCTGATCACG TCGAGCTGAG CCATGGCGAC TGGCGCGGTA CGCTGTCGCG CGAGCAGTTC 
GAGGCGCTGA TCGAGCCCAT GGTCGCACGC AGCCTCAAGG CCTGCCGGCG CGCGCTGCGC 
GATTCGGGCG TCGAGCTGGA AGAAGTCAGC GCCGTGGTCA TGGTCGGTGG CTCCACTCGC 
GTGCCTCGCG TGCGCGAGGC GGTGGGCGAG CTGTTCGGTC GCACGCCGCT GACCAATATC 
GATCCCGATC AGGTGGTGGC CATCGGCGCT GCGATCCAGG CTGACACCCT GGCGGGCAAT 
CAGCGTGGCG AGGGCGAAGA GCTGCTGTTG CTGGATGTGA TCCCGCTGTC GCTCGGCCTG 
GAAACCATGG GCGGGCTGAT GGAGAAGCTG ATTCCGCGCA ATACCACCAT TCCGGTAGCG 
CGTGCGCAGG ACTTCACTAC CTACAAGGAT GGCCAGACGG CCATGATGAT TCACGTGCTG 
CAGGGCGAGC GCGAGCTGAT CGCCGACTGC CGCTCCCTGG CACGTTTCGA ATTGCGCGGC 
ATCCCGCCGA TGGTGGCTGG TGCGGCGAAG ATTCGAGTGA CCTTCCAGGT CGATGCCGAC 
GGCCTGCTCA GCGTCGCCGC GCGCGAGTTG GGCTCGGGCG TGGAGGCGAG CATTCAGGTC 
AAGCCTTCCT ATGGCCTGAC CGATGGCGAG ATCGCGCGCA TGCTGCAGGA CTCCTTCCAG 
AACGCCGGCG ACGACAAGGC TGCACGGGCT CTGCGTGAGC AGCAGGTCGA TGCCCAGCGC 
CTGATCGAGG CGGTCGAGGC GGCCCTGCAA GCCGATGGCG AGCGCCTGCT CGATGCCGAG 
GAGCGTGAGG TCATCGAATT GCAGGTGCAG GAGCTGCGCG ACCTGCTCGC CAGCAATGAC 
GGCCTGGCCA TCGAGCGGCA GAGCAAACGC CTGTCGCAGG TGACCGATGC TTTTGCTGCC 
CGTCGTCTTG ATTCGACGGT GAAGGCCGCG CTGGCTGGGC GCAATCTCAA CGAGATCGAG 
GAATAA 

 

Protein sequence

MALLQIAEPG QSPQPHQRRL AVGIDLGTTN SLVAAVRSGL AEPLADGDGK VILPSAVRYH 
PQHVEVGESA KLAAASDPFN TVLSVKRLMG RGIADVHQLG EQLPYRFAAG ESHMPFIETV 
QGAKSPVEVS AEILKTLRLR AEQTLGGELV GAVITVPAYF DDAQRQATKD AARLAGLNVL 
RLLNEPTAAA VAYGLDQKAE GVVAIYDLGG GTFDISILRL TGGVFEVLAT GGDSALGGDD 
FDHAIADWII QQAGISSDLD PSAQRSLLQA ACAAKEGLTN ADHVELSHGD WRGTLSREQF 
EALIEPMVAR SLKACRRALR DSGVELEEVS AVVMVGGSTR VPRVREAVGE LFGRTPLTNI 
DPDQVVAIGA AIQADTLAGN QRGEGEELLL LDVIPLSLGL ETMGGLMEKL IPRNTTIPVA 
RAQDFTTYKD GQTAMMIHVL QGERELIADC RSLARFELRG IPPMVAGAAK IRVTFQVDAD 
GLLSVAAREL GSGVEASIQV KPSYGLTDGE IARMLQDSFQ NAGDDKAARA LREQQVDAQR 
LIEAVEAALQ ADGERLLDAE EREVIELQVQ ELRDLLASND GLAIERQSKR LSQVTDAFAA 
RRLDSTVKAA LAGRNLNEIE E