Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3503 |
Symbol | |
ID | 5105971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 3865092 |
End bp | 3866240 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640504755 |
Product | radical SAM protein |
Protein accession | YP_001188983 |
Protein GI | 146308518 |
COG category | [R] General function prediction only |
COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAATA CCACCGGCAA GATCAACCTG CTGGGCCTGA CCCAGCCGGA AATGGAACAG TTCTTCGAGT CCATCGGCGA GAAGCGCTTC CGTGCCGGCC AGGTAATGAA GTGGATTCAC CACTTTGGCG TCGATGATTT CGCCGCCATG ACCAATGTCG GCAAGGCCTT GCGCGAGAAG CTCGAGGCCT CTGCCGAGAT TCGCGGCCCG GAAGTGGTCA GCGAGAATAT TTCCGCCGAT GGCACGCGCA AGTGGGTGGT GCGTGTGGCG TCGGGCAGCT GCGTGGAAAC CGTGTACATC CCGCAGAATG GCCGCGGCAC CCTGTGCGTG TCGTCGCAGG CCGGTTGTGC CCTGGACTGC AGCTTCTGCT CCACCGGCAA ACAGGGTTTC AACAGCGACC TGACCAGCGC CGAGATCATC GGCCAGGTGT GGATCGCCAA CAAATCCTTC GGCACCGTGC CGGCGAAGAT CGACCGCGCC ATCACCAACG TGGTGATGAT GGGCATGGGC GAGCCGCTGC TGAATTTCGA CAACGTCGTC TCTGCCATGC AGATCATGAT GGACGATCTG GGTTATGGCA TTTCCAAGCG CAAGGTGACC CTGTCCACCT CCGGCGTGGT GCCGATGATC GACAAGCTGG CCGAAGTCAT CGACGTGTCT CTGGCCCTGT CGCTGCACGC GCCCAACGAC GAGCTGCGCA ACCAGCTGGT GCCGATCAAC AAGAAGTATC CGCTGGACAT GCTGCTGGCG GCCTGCAAGC GCTACGTCGC CAAGCTTGGC GAGAAACGTG TGCTGACCAT CGAGTACACC CTGCTCAAGG GCGTCAACGA TCAGCCCGAG CACGCTGAGC AGATGATCGC ACTTCTCGCC GATGTGCCTT GCAAGATCAA CCTGATTCCG TTTAATCCCT TCCCCTTCTC GGGGTACGAG CGGCCGAGCA ATAACGCCAT TCGCCGCTTC CAGGACCTGT TGCACAAGGC CGGTCATAAC GTCACGGTAC GCACTACGCG GGGTGACGAT ATCGATGCGG CCTGCGGCCA GTTGGTCGGC CAGGTGATGG ATCGTACCCG GCGTAGTGAA CGCTACATTG CCGTGCGCCA ACTGGGCAGC GAGGCACAAG AGCCACGCGC TGCCGCTAAC CGAAATTGA
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Protein sequence | MTNTTGKINL LGLTQPEMEQ FFESIGEKRF RAGQVMKWIH HFGVDDFAAM TNVGKALREK LEASAEIRGP EVVSENISAD GTRKWVVRVA SGSCVETVYI PQNGRGTLCV SSQAGCALDC SFCSTGKQGF NSDLTSAEII GQVWIANKSF GTVPAKIDRA ITNVVMMGMG EPLLNFDNVV SAMQIMMDDL GYGISKRKVT LSTSGVVPMI DKLAEVIDVS LALSLHAPND ELRNQLVPIN KKYPLDMLLA ACKRYVAKLG EKRVLTIEYT LLKGVNDQPE HAEQMIALLA DVPCKINLIP FNPFPFSGYE RPSNNAIRRF QDLLHKAGHN VTVRTTRGDD IDAACGQLVG QVMDRTRRSE RYIAVRQLGS EAQEPRAAAN RN
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