| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3484 |
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| Symbol | |
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| ID | 5105952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3843406 |
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| End bp | 3844662 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640504736 |
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| Product | phage integrase family protein |
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| Protein accession | YP_001188964 |
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| Protein GI | 146308499 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTACTG ATAGCAAACT GCGCAATCTC AAGCCCAAGT CCAAGCTGTA CAAGGCTTTC
GACCGCGATG GTATGTACGT GACGGTATCG CCTACCGGTA CCGTCACCTT TCGCTACGAC
TACCGTCTCA ATGGACGCAG AGAAACGCTA ACCATCGGAC GCTATGGTCC GACTGGCATA
TCCCTGGCCA TGGCTCGCGA GAAGCTGTTC GATGCCAAGC GCATGGTCGC CCTGGGCAAG
TCTCCCTCCC TGGAAAAGCA GCGCGCGAAG CGGCGCCTGA ACGCTGCCAA GAATTTCGGT
GAAACGCTGA CGAAGTGGTT GGCCGGTGCG CGCATGGCCG ACAGCACGCG CGCGATGCGC
AAAAGCATCA TCGACCGAGA CATCCTGCCG GTCTTCGAGA ACCGGCTGCT GACCGAAATC
ACCCCTGACG ATCTGCGAGC CCTGTGTGCC AAGGTGAAGG CTCGAGGAGC GCCGGCAACT
GCGGTCCATA TTCGCGACAT CGTGAAACAG GTCTATGCGT TCGCGATCCT GCATGGAGAG
AAGGTCGAGA ATCCGGCTGA CGACGTTAAG GCGTCTTCCA TCGCCACTTT CGTGCCGAAG
GATCGAGCGC TGAGCCCGAC CGAAATTCGG CTGGCCTTCC ATCAACTGGA GACTATCGCC
GCGTATCCCA CGATCAAGCT GGCCTTGCGG CTGGTGCTGC TGACCTTGGT ACGCAAGAGC
GAGCTGATCG AGGCAACCTG GGACGAGGTG GACTTCAAGA ACGCCACCTG GACGATCTCC
AAGGAACGGA TGAAGGGGCG TAACCCGCAC GTTGTCTACC TGTCGCGCCA GGCCTTGGAC
ATCTTCGTGG CGTTGCACAC CTGTGCGGCC GGTTCCCGCT ATGTGTTGCC CTCGCGCTAT
GACATCTACC GCTGTATGTC GCACGCCACC CTGAACCGCA TCACCCAGCT TATCGCCTCC
CGTGCGAAGG AAGCAGGCCT GCCGTTGGAG CCGTTCACCG TCCACGACCT GCGCAGGACT
GGTTCCACGC TGCTCAACGA GGTGGGCTTC AACGGCGACT GGATCGAGAA ATGCCTGGCT
CACGAGGATG GTCGCTCCTC GCGCTCGGTC TACAACAAGG CCGAGTACGC GGAACAGCGC
AGGCACATGC TGCAGGAGTG GGCGGACATG ATCGACGCCT GGATCGATGG CCGCACTCAT
GTTCCCCAGC TACTGCCGGA CAGCGTTGTA GTGCCGGTGT TGAGTGCCAC GGTTTAA
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| Protein sequence | MLTDSKLRNL KPKSKLYKAF DRDGMYVTVS PTGTVTFRYD YRLNGRRETL TIGRYGPTGI
SLAMAREKLF DAKRMVALGK SPSLEKQRAK RRLNAAKNFG ETLTKWLAGA RMADSTRAMR
KSIIDRDILP VFENRLLTEI TPDDLRALCA KVKARGAPAT AVHIRDIVKQ VYAFAILHGE
KVENPADDVK ASSIATFVPK DRALSPTEIR LAFHQLETIA AYPTIKLALR LVLLTLVRKS
ELIEATWDEV DFKNATWTIS KERMKGRNPH VVYLSRQALD IFVALHTCAA GSRYVLPSRY
DIYRCMSHAT LNRITQLIAS RAKEAGLPLE PFTVHDLRRT GSTLLNEVGF NGDWIEKCLA
HEDGRSSRSV YNKAEYAEQR RHMLQEWADM IDAWIDGRTH VPQLLPDSVV VPVLSATV
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