| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3478 |
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| Symbol | |
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| ID | 5107287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3838257 |
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| End bp | 3839300 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640504731 |
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| Product | luciferase family protein |
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| Protein accession | YP_001188959 |
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| Protein GI | 146308494 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTTT CTTTGTTCGT GCATATGGAG CGCTACGACG AGCAGACCAG TCATCGCCAA
CTGTTCGAGG ACCTCACCGA GTTGACCCTG CTGGCGGAAG CCGGCGGTTT CAGCACCGTA
TGGATCGGCG AACACCATGC GATGGAGTAC ACCATCTCGC CGAGCCCGAT GCCGCTGCTG
GCCTACCTGG CCGCGCGCAC CAGCACCATC CGCCTCGGCG CCGGCACCAT CATCGCGCCC
TTCTGGCACC CCATCCGCGT CGCCGGCGAA TGTGCCCTGC TCGACGTGAT CAGCAACGGG
CGCATGGAGG TGGGCCTGGC CCGCGGCGCC TACCAGTACG AGTTCGACCG CATGGCCAAC
GGCATGCCGG CCACCGACGG CGGCAAGTAC CTGCGCGAGA TGGTGCCGGT GGTCCAGGCG
CTATGGCGGG GCGACGTCGC CCACGACGGC GAGATCTGGA AGTTCCCCAC CTCCACCTCC
TCGCCGCGGC CGCTCCAGCA GCCCGGTCCG CCCATGTGGA TCGCCGCACG CGACCCGGAC
TCGCACAACT TCGCCGTGGC CAATGGCTGC AACGTGATGG TCACCCCGCT GATGAAGGGC
GACGAGGAAG TGGTCGATCT GAAGAACAAG TTCGAGGCCG CCCTGGCCAA CAATCCCGAG
GTGCCGCGTC CGCAACTGAT GGTGCTGCGC CACACCCACG TCCACGCCAA GGACGACCCG
GACGGCTGGA AGGTCGGCGC CGCGGCCATC TCCAAGTTCT ACCGCACCTT CGACGCCTGG
TTCGGCAACA AGCAGACCCC GGTCAACGGC CTGCTGCCGC CGAGCCCGGA AGAGAAGTTC
AAGGAGCGCC CGGAGTTCGA GCTGGACAAC ATCCGCAAGA ACACCATGAT CGGCACCCCG
GAAGAAATTA TCGCGCGCAT CCGCCACTAC CAGGAGCTGG GCGTGGACGA ATTCAGCTTC
TGGGCCGACA ACAGCCTGCC GCACGCCGAG AAGAAGAAAT CCCTGGAGCT CTTCATCAAG
CACGTGGTGC CCGCTTTCCG CTAA
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| Protein sequence | MKFSLFVHME RYDEQTSHRQ LFEDLTELTL LAEAGGFSTV WIGEHHAMEY TISPSPMPLL
AYLAARTSTI RLGAGTIIAP FWHPIRVAGE CALLDVISNG RMEVGLARGA YQYEFDRMAN
GMPATDGGKY LREMVPVVQA LWRGDVAHDG EIWKFPTSTS SPRPLQQPGP PMWIAARDPD
SHNFAVANGC NVMVTPLMKG DEEVVDLKNK FEAALANNPE VPRPQLMVLR HTHVHAKDDP
DGWKVGAAAI SKFYRTFDAW FGNKQTPVNG LLPPSPEEKF KERPEFELDN IRKNTMIGTP
EEIIARIRHY QELGVDEFSF WADNSLPHAE KKKSLELFIK HVVPAFR
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