| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3475 |
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| Symbol | |
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| ID | 5105945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3834557 |
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| End bp | 3835135 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640504729 |
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| Product | hypothetical protein |
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| Protein accession | YP_001188957 |
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| Protein GI | 146308492 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4583] Sarcosine oxidase gamma subunit |
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| TIGRFAM ID | [TIGR01375] sarcosine oxidase, gamma subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCC TCAATACCCT CGAGCGCTGC GCGCTCATCG ACCTCACCGA CCTGCCGCGG
GTGGGCTTTC GCGGCGTGGA CAGCGCCACC TGGCTCAGAG AGCGCGGCTA CCAACTGCCA
GAAGTGCCCA ACCGGGCACT GCTCCAGGCC GACGGATCGC TGGTGGCACG CCTGTCGCAG
ACCGAGTACC TGCTGCTCGG CAGCCTGGCC GATCGAGGCG AGCGGATTGC CAGCGAGGAA
GCTGGGTGGC AGTTGACCGA TCAGGGCAAC TACCTGCTGC CGCGCCAGGA CAGCCACGCC
TGGCTGCAAC TGTCCGGTCG GCACGTGGCC GAGGTGATGG CCAAGCTCTG CGGAGTCGAC
CTGCGTCCAC AGGCCTTCCC CACCGGCCAG GTGGCCCAGA CTTCAGCAGC CCGGATCAAC
GTCATAGTGA TCAATGCCGG CTCGGGCGAT CTGCCGCGCC TGCATATCCT CTGCGACCGA
GCGTCGCTCG AGTACTTCCG CGACGCCATG CTCGATGCCA TGAACGAGTT CGGCGGCCAG
CCGGTGGCGC TGGACGTGCT GGAAAAGCAG CTGGCCTGA
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| Protein sequence | MTSLNTLERC ALIDLTDLPR VGFRGVDSAT WLRERGYQLP EVPNRALLQA DGSLVARLSQ
TEYLLLGSLA DRGERIASEE AGWQLTDQGN YLLPRQDSHA WLQLSGRHVA EVMAKLCGVD
LRPQAFPTGQ VAQTSAARIN VIVINAGSGD LPRLHILCDR ASLEYFRDAM LDAMNEFGGQ
PVALDVLEKQ LA
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