Gene Pmen_3464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3464 
Symbol 
ID5105934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3822258 
End bp3822608 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content63% 
IMG OID640504718 
Productsmall multidrug resistance protein 
Protein accessionYP_001188946 
Protein GI146308481 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.667657 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTGT TCAGTGCCAA TGCCGCCGGC TGGGGCTTCC TGCTTCTGGC CGGCCTCAGC 
GAGATCTGCT ATGCCGCTGC GATTCCCCGT ACTCAGGGGT TTACCCGTCT GTGGCCAAGC
CTGTATTGCG GCTTCTTCAT CGCCCTTAGT CTGTATCTGC TGGCTCAGGC GGTGCGCACT
CTGCCGGTGG GCACCGCCTA CGCCGTGTGG GTCGGCATCG GTGCACTGGG CACCGCCGTC
TACGGCATCA TCTATCTCGA CGAACCGGCT GACGCTGCGC GGCTGGCTTG TCTGGGGCTC
ATCCTTGCCG GTGTGGTGGG ACTCAAGCTG GTTTCCGGCA CGATAGCCTG A
 
Protein sequence
MSLFSANAAG WGFLLLAGLS EICYAAAIPR TQGFTRLWPS LYCGFFIALS LYLLAQAVRT 
LPVGTAYAVW VGIGALGTAV YGIIYLDEPA DAARLACLGL ILAGVVGLKL VSGTIA