Gene Pmen_3458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3458 
Symbol 
ID5105928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3814026 
End bp3814937 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content68% 
IMG OID640504712 
Productbifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 
Protein accessionYP_001188940 
Protein GI146308475 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG TCCTGTCTCC CAAGCTCATC GATGGCAAGG CGGCGGCCGC CCGCGTGCTG 
GCCGAAGTGA CCGAGGATGT GCGCACCCTG AAAGCCGCCG GCATCAAACC GGCGCTGGCC
GTGGTGCTGG TCGGCGACGA CCCGGCCAGC CAGGTCTATG TGCGCAACAA GGTGCTGCGC
GCCGAGGAAT GCGGCATCCG CTCCCTGGAA CACAAGCTGC CGGCAGACAC GGCTGAAGCC
GACCTGCTGG CACTTATCCA CAGCCTGAAT GCCGACTACA GCGTGCACGG CATTCTCGTG
CAGTTGCCGC TGCCGGCGCA TATCGACGAA ACCCGCGTGC TGCAGGCGAT CAACCCACTG
AAGGACGTCG ACGGCTTCCA CGCCGAAAAC GTCGGTGGCC TCAGCCAAGG CCGCGACGTG
CTCACGCCCT GCACCCCGGC GGGCTGCCTG CGCCTGCTGC AGGACAGCTG CGGCGACCTG
ACCGGCAAGC ATGCGGTGGT CATCGGCCGC TCCAATATCG TCGGCAAACC CATGGCCGCC
CTGCTGCTCA AGGCCCACTG CTCGGTCAGC GTGGTGCACT CGAAAAGCGC CAACCTGCGC
GAGCTGTGCC GCCAGGCCGA CATCGTCGTC GCCGCCGTCG GCAAACCGCG TCTGGTCGAC
GCCGACTGGC TGAAACCCGG CGCCGTGGTC ATCGACGTCG GCATCAACCG CATCGACGAA
GGCGGCCGTT CGCGCCTGGT CGGCGATGTC GACTTCGACT CCGCCCTCAC CCGCGCCGCC
GCCATCACCC CAGTGCCCGG CGGCGTCGGC CCCATGACCA TCGCCTTCCT GATGAAGAAC
ACCCTGGTCG CGGCGCGCCT CCAGCACCCG GCCACCGGCC TGCCCCTATC TACCTTGGAG
AACCCCGCAT GA
 
Protein sequence
MSAVLSPKLI DGKAAAARVL AEVTEDVRTL KAAGIKPALA VVLVGDDPAS QVYVRNKVLR 
AEECGIRSLE HKLPADTAEA DLLALIHSLN ADYSVHGILV QLPLPAHIDE TRVLQAINPL
KDVDGFHAEN VGGLSQGRDV LTPCTPAGCL RLLQDSCGDL TGKHAVVIGR SNIVGKPMAA
LLLKAHCSVS VVHSKSANLR ELCRQADIVV AAVGKPRLVD ADWLKPGAVV IDVGINRIDE
GGRSRLVGDV DFDSALTRAA AITPVPGGVG PMTIAFLMKN TLVAARLQHP ATGLPLSTLE
NPA