| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3457 |
|---|
| Symbol | |
|---|
| ID | 5105927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 3813175 |
|---|
| End bp | 3814029 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640504711 |
|---|
| Product | formyltetrahydrofolate deformylase |
|---|
| Protein accession | YP_001188939 |
|---|
| Protein GI | 146308474 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0788] Formyltetrahydrofolate hydrolase |
|---|
| TIGRFAM ID | [TIGR00655] formyltetrahydrofolate deformylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCATT ACATCCTCAA GATCAGTTGC CCGGCCACCT CCGGCATCGT CGCGGCGGTC
ACCACCTACC TGGCCGGGCG CGACTGCTAC CTCAGCGAGC TGGCGCAGTT CGACGACGAG
TTCACCGGGC GCTTCTTCAT GCGTGCGGTG TTCCGCTTCA ATGACACGAC CCGGGCGGAC
ATCGACGCCC TGCGCCAGGG TTTCGATGAC ATTGCCGTGC CCTTCGCCAT GGACTGGGAA
CTGTTCGAAA GCCAGCGGCC GATGCGCGTG CTGCTGATGG TGAGCAAGTT CGACCACTGC
CTGGTGGACC TGCTTTATCG CCACCACAAG GGCGAGCTGG ACATGCAGAT CACCGCCATC
GTCTCCAACC ACCTCGACCT GCGGCCAATG GCCGAGCGCG AGGGCATCCG CTTCATCTAC
CTGCCGGTGA CCCGCGACAC CAAGGCCCAA CAGGAAGCGG CGCTGATGAA GATCGTTGAC
GAAACGCAGA CCGAGCTGGT GGTGCTCGCG CGCTACATGC AGATCCTCTC CGATGACCTG
TGCCAGCAGC TCTCCGGCCG CGCCATCAAC ATCCATCATT CCTTCCTGCC CGGTTTCAAG
GGCGCCAAGC CCTATCACCA GGCCTATGAA CGCGGCGTCA AGCTGATCGG CGCCACCGCG
CACTACGTGA CTTCGGACCT CGACGAAGGT CCGATCATCG AACAGGAAGT CCAGCGCGTG
GACCACGCCT ATCTGCCCGA TGACCTCGTC GCCATCGGCC GGGACACCGA GACGGTGGCC
CTCTCCAAGG CGCTGAAGTA CCACCTGGAA CACCGCGTGC TCCTCAACGG CGACAAGACG
GTGATCTTCC GATGA
|
|---|
| Protein sequence | MNHYILKISC PATSGIVAAV TTYLAGRDCY LSELAQFDDE FTGRFFMRAV FRFNDTTRAD
IDALRQGFDD IAVPFAMDWE LFESQRPMRV LLMVSKFDHC LVDLLYRHHK GELDMQITAI
VSNHLDLRPM AEREGIRFIY LPVTRDTKAQ QEAALMKIVD ETQTELVVLA RYMQILSDDL
CQQLSGRAIN IHHSFLPGFK GAKPYHQAYE RGVKLIGATA HYVTSDLDEG PIIEQEVQRV
DHAYLPDDLV AIGRDTETVA LSKALKYHLE HRVLLNGDKT VIFR
|
|---|
| |