Gene Pmen_3451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3451 
Symbol 
ID5105921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3807947 
End bp3808432 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content63% 
IMG OID640504705 
Productflavin reductase domain-containing protein 
Protein accessionYP_001188933 
Protein GI146308468 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.299495 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.309521 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATG CAAATACCTA CAAACTCGTC ATGGGCTCCT TTCCGTCCGG CGTCACCGTG 
ATCACCACGC TGGACGACGA TGGCCAGATC GTCGGCCTGA CGGCCAGCGC CTTCAGCTCC
CTGTCCATCG ACCCGGCCCT GGTGCTGTTC TGCCCGAACT ACAGCTCCGA CTCCTACCCG
GTGCTGATCA AGAACAAGCG CTTCGCCATC CACCTGCTGT CGGCAGCGCA GCAGGGCGAA
GCCTATGCCT TCGCCAAGAA GGGCAAGGAC AAGGCCCACG GTATCGAATG GACGCTGAGC
GAGCTGGGCA ACCCACTGCT AGGCAACGCC ACCGCCATCA TCGAGTGCGA GTTGTGGCGC
GAATACGAAG GTGGCGATCA CGCGATCCTG GTGGGTGCGG TGCAGAACCT GATCGTGCCG
CAGCAGCGCG TCGAACCGAT GATCTACTGC CGCGGCAAGA TGGGCGCCCT GCCGGCCTTC
GCCTGA
 
Protein sequence
MIDANTYKLV MGSFPSGVTV ITTLDDDGQI VGLTASAFSS LSIDPALVLF CPNYSSDSYP 
VLIKNKRFAI HLLSAAQQGE AYAFAKKGKD KAHGIEWTLS ELGNPLLGNA TAIIECELWR
EYEGGDHAIL VGAVQNLIVP QQRVEPMIYC RGKMGALPAF A