| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3450 |
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| Symbol | |
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| ID | 5105920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3806502 |
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| End bp | 3807656 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640504704 |
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| Product | ABC transporter related |
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| Protein accession | YP_001188932 |
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| Protein GI | 146308467 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.622564 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.365938 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCCG TAATCCAAGA CAGCCGCAGC CAGGCACCGC TACCGCTGGT CAGCCTGCGC
AACCTGAACA AGCACTATGG CGACTTCGTC GCCGTGGACG ATATTTCCCT CGACATCCAG
GAGGGCGAGT TCCTCACCTT CCTCGGCTCC AGTGGCTCGG GCAAGAGCAC TACCCTGTCG
ATGCTGGCCG GCTTCGAGAC GCCCAGCAGC GGGGAGATCC TGGTCGACGG TAAATCCCTG
GTGAAGGTAC CGCCGCACAA GCGCGACATC GGCATGGTGT TCCAGCGCTA CTCGCTGTTC
CCGCACCTGA ACGTGCGCGA CAACATCGGC TTCCCCCTGG ACATTCGCAA GCAGGCGCGC
GGCGAGCGCG AGCGCCAGGT CGAGGCCATG CTCAAGCTGG TGCAACTGGA GCAGTTCGCC
CACCGGCGCC CGGCCCAGCT CTCCGGCGGC CAGCAACAGC GCGTGGCGAT CGCCCGCGCC
CTGGTCTACG AGCCGCGCAT CCTGCTGATG GACGAGCCGC TCGGCGCCCT CGACAAGAAA
CTGCGCGAGG ACCTGCAGGA CGAGTTGCGC CACCTGCACC GTCGCCTCGG CATCACCATC
GTCTATGTGA CCCATGACCA GGAAGAAGCC ATGCGCCTGT CGCAGCGCAT CGCCATCTTC
AGCCACGGCC GGATCGTTGG CCTGGGCAGC GGCTACGACC TGTACCAGAA CCCGCCGAAC
GCCTTCGTCG CCTCTTTCCT CGGCAACTCC AACTTTCTCA AGATCAAGGC CCAGGGCCAC
GCGGCGGCCA GTTTCGAGGG CCAGACCCTG ATCGTTCGCC CCACCGTGGG CATCGCCGAG
GGCCAGGAAC TGCTGCTGAT GGTGCGCCCG GAGAAAGCCC AGGTGCTGAC CCCGCAGCAG
GCCGGGAGCA TGCCGCGGCC GGCCGGCTGG AACGAGATCC AGGCGCGGGT CGCGGAAACC
GTGTTCCTCG GCGAAAGCCT GACCTGCAGC GTGACCACCC CCGGCGGCAC CCAGCTGACC
CTGAAGGAGC TGTCCGGCAG CACCCCGCCC CTGCAAACCG GCGCCCCGGT TCTGGTGCGC
TGGGCCGCGG ACGATGCCTG CGTCTACAAC CAGTGGCAGG AAAGCGACCT GAGCAAGGCC
GCCGGCGCGC ACTGA
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| Protein sequence | MSAVIQDSRS QAPLPLVSLR NLNKHYGDFV AVDDISLDIQ EGEFLTFLGS SGSGKSTTLS
MLAGFETPSS GEILVDGKSL VKVPPHKRDI GMVFQRYSLF PHLNVRDNIG FPLDIRKQAR
GERERQVEAM LKLVQLEQFA HRRPAQLSGG QQQRVAIARA LVYEPRILLM DEPLGALDKK
LREDLQDELR HLHRRLGITI VYVTHDQEEA MRLSQRIAIF SHGRIVGLGS GYDLYQNPPN
AFVASFLGNS NFLKIKAQGH AAASFEGQTL IVRPTVGIAE GQELLLMVRP EKAQVLTPQQ
AGSMPRPAGW NEIQARVAET VFLGESLTCS VTTPGGTQLT LKELSGSTPP LQTGAPVLVR
WAADDACVYN QWQESDLSKA AGAH
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