| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3448 |
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| Symbol | |
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| ID | 5105918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3804775 |
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| End bp | 3805671 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640504702 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001188930 |
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| Protein GI | 146308465 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.420206 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCG CCGCCGTGCA GTTGACCCAG TCACCCGCCG GCGGCACTCC CCGCTCGGCG
CGCCTGGCTC GCTGGAAAGG TTCGCTCCCG CTGCTGCCCG CCCTGCTGTT TCTCAGCCTG
TTCTTCCTCG CCCCGCTGAT CGGCCTGCTG CTGCGCGGGG TGCTGGAACC GGAGCCGGGT
CTGGGCAACT ACGAAACCCT GTTCGCCAAC TCGGCCTATG CCCGCGTGCT GTTCAATACC
TTCGCCGTCG CCGGCCTGGT CACCCTGATC AGCCTGCTGC TGGGCTTCCC GCTGGCCTGG
GCGATCACCC TGGCACCACG CGGCTGGGGT CGCTGGCTGC TGAGCATCGT GCTGCTGTCG
ATGTGGACCA GCCTGCTGGC ACGCACCTAC TCCTGGCTGG TGCTGCTGCA GGCCTCCGGG
GTGATCAACA AGGCGCTGAT GGCCATGGGC CTGATCGACC AGCCGCTGGA GATGGTGCAC
AACCTGACCG GCGTGGTGAT CGGTATGAGC TACATCATGA TCCCCTTCAT CGTGCTGCCG
CTGCAGGCCA CCATGAGCGC CATCGACCCC ATGGTGCTGC AGGCCGGCTC GATCTGTGGC
GCCAGCCCCT GGCGCAACTT CTTCCGGGTG TTCCTGCCGC TGTGTCGGCC TGGGCTGTTC
TCCGGCGGCC TGATGGTGTT CGTCATGTCG CTCGGTTACT ACGTCACCCC GGCCCTGCTC
GGTGGCGCGC AGAACATGAT GCTGCCGGAG TTCATCGTCC AGCAGGTGCA GTCCTTCCTC
AACTGGGGCC TGGCCAGTGC CGCCGCCGCG CTGCTGATCG CCATCACCCT GCTGCTGTTC
TACGCCTATC TGAAGCTGCA ACCGGAATCG CCGGTGGCTT CCAGTACAGC GAGGTAA
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| Protein sequence | MKIAAVQLTQ SPAGGTPRSA RLARWKGSLP LLPALLFLSL FFLAPLIGLL LRGVLEPEPG
LGNYETLFAN SAYARVLFNT FAVAGLVTLI SLLLGFPLAW AITLAPRGWG RWLLSIVLLS
MWTSLLARTY SWLVLLQASG VINKALMAMG LIDQPLEMVH NLTGVVIGMS YIMIPFIVLP
LQATMSAIDP MVLQAGSICG ASPWRNFFRV FLPLCRPGLF SGGLMVFVMS LGYYVTPALL
GGAQNMMLPE FIVQQVQSFL NWGLASAAAA LLIAITLLLF YAYLKLQPES PVASSTAR
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