| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3447 |
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| Symbol | |
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| ID | 5105917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3803753 |
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| End bp | 3804778 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640504701 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001188929 |
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| Protein GI | 146308464 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.544625 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGTTCA AGAAAACAGC TACCGCGGTA ATCGCCACCG CACTGATGGC CATAACCGCA
GGCACGGCCA CCGCAGCCGA TAACCTCAGC TTCGTCAGCT GGGGCGGCAC CACCCAGGAA
GCGCAGAAAC AGGCCTGGGC CGCGCCCTTC AGTGAAGCCA CCGGCATTCG CGTGCTGCAG
GATGGGCCCA CCGACTACGG CAAGCTCAAG GCCATGGTCG AAAGCGGCAA CGTGCAGTGG
GATGTGGTCG ACGTGGAAGC CGACTTCGCC CTGCGCGCTG CCCGCGAAGG CTTGCTGGAG
CCGCTCGACT TCAACGTCAT CGACCGCGAG CGCATCGATC CGCGCTTCGT TTCCGACCAC
GGCGTCGGCT CTTTCTTCTT CTCCTTCGTG CTCGGCTACA ACGAGCGTCG TCTGGGCGGC
AAGCAGCCGC AGGACTGGAG CGCTCTGTTC GACACCGCCA CCTACCCGGG CAAGCGCGCC
CTCTACAAAT GGCCGAGCCC CGGCGTGCTG GAACTGGCCC TGCTGGCCGA CGGCGTAACG
CCCGAGCAGC TGTATCCGCT CGATCTGGAT CGCGCCTTCA AGAAACTCGA CAGCATCAAG
AAGGACATCG TCTGGTGGGG CGGCGGCGCC CAGTCGCAAC AGCTGCTGGC CTCCGGCGAG
GCCAGCCTCG GCCAATTCTG GAACGGCCGC ATTCATGCAC TGGAACAGGA AGGCGCATCG
GTAGGCGTAA GCTGGAAGCA GAACCTGGTG ATGGCCGATT TTCTGGTCAT CCCCAAGGGC
GCCAAGAACA AGGATGCCGC GATGAAATTC CTCGCTGCCG CCAGCAGTGC CGAGGGCCAG
GCCGAGTTCG CCAACCTGAC CGCCTATGCA CCGGTGAATC TGGATTCCGT CCCGCACCTG
GAAGCCGACT TGGCGCCCAG CCTGCCCACG GCTCACGCCG CCGACCAGGT TACCCTGGAC
TTCGCCTACT GGGCCGAGCA TGGCAACACC ATTGCCGCCC GCTGGAATGA GTGGCTGCTG
AAATGA
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| Protein sequence | MVFKKTATAV IATALMAITA GTATAADNLS FVSWGGTTQE AQKQAWAAPF SEATGIRVLQ
DGPTDYGKLK AMVESGNVQW DVVDVEADFA LRAAREGLLE PLDFNVIDRE RIDPRFVSDH
GVGSFFFSFV LGYNERRLGG KQPQDWSALF DTATYPGKRA LYKWPSPGVL ELALLADGVT
PEQLYPLDLD RAFKKLDSIK KDIVWWGGGA QSQQLLASGE ASLGQFWNGR IHALEQEGAS
VGVSWKQNLV MADFLVIPKG AKNKDAAMKF LAAASSAEGQ AEFANLTAYA PVNLDSVPHL
EADLAPSLPT AHAADQVTLD FAYWAEHGNT IAARWNEWLL K
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