| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3442 |
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| Symbol | |
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| ID | 5105912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3799988 |
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| End bp | 3800371 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640504696 |
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| Product | 4-carboxymuconolactone decarboxylase |
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| Protein accession | YP_001188924 |
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| Protein GI | 146308459 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
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| TIGRFAM ID | [TIGR02425] 4-carboxymuconolactone decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.222691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAACG AGAAATACGA CAAGGGCCTG GCCATTCGCA CCCAGGTGCT GGGCGAGGCC
TACGTCAACA AATCCATCGA GAACGCCGAT GACTTCAACC GGCCGCTTCA GGAGCTGGTC
ACCGAGTATT GCTGGGGCCA CGTGTGGGGG CGCGAGGGTT TATCGCTGAA AGAGCGCAGC
ATGATAAACT TGGCGATGAT TTCGGCCCTC AATCGCCCTC ATGAGCTAAA GCTGCACATT
CGCGGCGCCC TGCGCAATGG CCTGAGCCGT GAGCAGATCC GCGAGATCCT GTTGCAGGTC
GGCATCTATT GCGGCGTACC TGCAGCAGTG GACAGCTTCC GCATCGCTCG CGAAGCTTTC
GCTGAAGCTG AGGCGGAGCA GTAG
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| Protein sequence | MSNEKYDKGL AIRTQVLGEA YVNKSIENAD DFNRPLQELV TEYCWGHVWG REGLSLKERS
MINLAMISAL NRPHELKLHI RGALRNGLSR EQIREILLQV GIYCGVPAAV DSFRIAREAF
AEAEAEQ
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