| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3441 |
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| Symbol | |
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| ID | 5105911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3798530 |
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| End bp | 3799969 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640504695 |
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| Product | succinate semialdehyde dehydrogenase |
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| Protein accession | YP_001188923 |
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| Protein GI | 146308458 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.301737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCTT TGCTGCGCCA ACAGGCCTAT ATCGACGGGC ACTGGCTCGA TGCCCGGGAC
GGCGCGACCC AGGCCATCTT CAACCCAGCC AACGGCCAGC AGATCGGCAG CGTGCCGCAC
ATGGGCGCGG CAGAGGCACG TCAGGCCATC ACTGCGGCCA ATGGCGCCTG GCCGGCCTGG
CGGGCACTGA CCGCCAAGGA ACGCAGCAAC CTGCTCAAGC GCTGGCATGC GCTGATTCTC
GATCACACCG ACGAACTGGC GCGCATTCTT ACCCTCGAGC AAGGCAAGCC ACTGGCCGAG
GCCAAGGGCG AGATCCTTTA CGCCGCCAGT TTCATCGAAT GGTTCGCCGA GGAAGCCAAA
CGCGTCTACG GCGACACCAT CCCGAGCCAC AAGGGCGATG CACGCATCGT CGTCAGCAAG
GAGCCGATCG GCGTGGTCGC TGCGATCACA CCGTGGAACT TCCCGGCGGC GATGATCACT
CGCAAGGTCG GCCCGGCCCT GGCCGCCGGC TGCACCTGCA TCATCAAGCC AGCACCGGAA
ACCCCCTTCA GCGCGCTGGC CCTGATGGTC CTCGCCGAAC AAGCCGGCAT TCCCGCCGGC
GTGCTCAATG TGGTCACTGG CGACGCCGTG GCCATCGGCG GCGAGCTGAC CAGCAGCGCG
CTGGTGCGCA AGCTCTCCTT CACCGGCTCG ACGCCGATCG GCAAGCTGCT GATGGCGCAG
TCTGCCAATA CCCTGAAGAA GGTTTCGCTG GAGCTGGGCG GTAACGCGCC GTTCATCGTC
TTCGACGACG CCGATCTGGA AAAGGCCGTG GAAGGCGCGC TGATCGCCAA GTACCGCAAC
GCCGGACAGA CCTGCGTGTG CGTCAACCGC TTCCTGGTGC AGGACGGCAT TCACGACGCC
TTCGTCGCGC GGCTGGCCGA ACGGGTCGCC GAACTGGCGG TGGGCGATGG CTTCGCCGAG
GGCGTCAAGC TCGGCCCGCT GATCAACCAG CGCGCGGTGG AGAAAGTCGC CGACCATGTG
CAGGACGCGC TGGCCAAAGG CGCACGCCTG ATCGCCGGTG GTGAGCGCCA TCCGCTGGGC
CACGGTTTCT TCCTGCCGAC GGTGCTGGCC GATGTAACGG CTGAGATGAA GGTGGCACGC
GAGGAAACCT TCGGCCCCCT GGCCGCGGTG TTCCGCTTCA CCGACGAAGC CGAGGCCGTG
CACCTAGCCA ATGACACCGA GTACGGCCTG GCCGCCTACT GCTATACCAA GGATCTGGGC
CGCGCCTGGC GCATGAGCGA GTCGCTGGAA TATGGCATGG TCGGCATCAA CGAGGGGCTG
ATATCCACCG AGGTGGCCCC CTTCGGCGGC GTCAAGTCAT CGGGCCTGGG CCGTGAAGGC
TCTAAATACG GTATCGAAGA CTATCTGGAG ATCAAGTACA CCCTCATGGG TGGCCTGTAA
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| Protein sequence | MNALLRQQAY IDGHWLDARD GATQAIFNPA NGQQIGSVPH MGAAEARQAI TAANGAWPAW
RALTAKERSN LLKRWHALIL DHTDELARIL TLEQGKPLAE AKGEILYAAS FIEWFAEEAK
RVYGDTIPSH KGDARIVVSK EPIGVVAAIT PWNFPAAMIT RKVGPALAAG CTCIIKPAPE
TPFSALALMV LAEQAGIPAG VLNVVTGDAV AIGGELTSSA LVRKLSFTGS TPIGKLLMAQ
SANTLKKVSL ELGGNAPFIV FDDADLEKAV EGALIAKYRN AGQTCVCVNR FLVQDGIHDA
FVARLAERVA ELAVGDGFAE GVKLGPLINQ RAVEKVADHV QDALAKGARL IAGGERHPLG
HGFFLPTVLA DVTAEMKVAR EETFGPLAAV FRFTDEAEAV HLANDTEYGL AAYCYTKDLG
RAWRMSESLE YGMVGINEGL ISTEVAPFGG VKSSGLGREG SKYGIEDYLE IKYTLMGGL
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