Gene Pmen_3431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3431 
Symbol 
ID5105903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3787388 
End bp3789169 
Gene Length1782 bp 
Protein Length593 aa 
Translation table11 
GC content45% 
IMG OID640504687 
Producthypothetical protein 
Protein accessionYP_001188915 
Protein GI146308450 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATGGA CGGAGTCTCA CATGCCCGAG CGGTTAACCC TGACCCAGAA TGCTCAGTTT 
TATCGTGAAG ATGTGGCGCT GACAAACGAA GCCATTCGTA ATATTTTGGA TGCGGCTTCT
GATAACAAAA CGCTTGGTTC TGTTTTTCTT ATCGACCAGA TAGACGCAGT ACGTGAGCTT
GAGGACGGCA GTCAATTTCG GTTCAGTCTG AGAGTATTCC CAACCGCGAG ACCTGTCCAC
TTCTGGGGCG AGCCTCTATC AGACTTAATC CATGCGCTCA TTTTGATCAT CCAGATTGAC
GGCTATGTGG CGGTACTGAA GAAGTCCTGC GCAAGCGTTA CCGAGGTTCT AGAAAGATAC
CTCACCCCCA TCAAGAGTTC AGAGTTAACG GCTTCATTCA GCGATGAAGA AGCTGAGTTT
CAAAAAATCG CGATGCGGAA CATGACTGTT TCGGAACGAG CAATGCGCAG TAAGGCTTAC
GAGGCAGCAG ATCTGAAAGG TCTGCTTTCC TTACACGCTG CGGGAAGGTC AATTCCCTAC
TTTTTCAAAC TTAAGCTCAA TGGGCAAGTT AAAACTATCT CGGCACAAAG TGGCCGAGTA
GTGGAGTCCT CCGAGCGAAA ATCACTTAAC GACGTCGTGA AGTGGGTTCG CCTGCAAATT
GAGCAGATCA AAAATCCTTC TGGTGAAAAA GAATTCTTAG AAGCATTCGC ACAGATGGTT
GAGCTAGATA TCGTATGGGA TGCCACGCAA CCTACTGCCG CATTAATTGA GTCATCTTTC
ATCGTTGATA ATTTGCTAGA GAAGGATGTG CCGTTAATCT ATACGACAAA AAGAGGTCGA
TCTTTCGAGC TGACAGGAAA GCAAATTAGC GCATTAATTC ACCAACTTGA AAAGGTATAC
GAAGTTAACC CAGCACCGGG CTTTGAACTA AATGGCACGA GCAGGTCGGC CAGCCTTAAG
AAAAATAAAA ATTCAATTTC CTTGAGTTCC CCAGCTTTAC GGAAGATCAA GCTTGAGGAA
AATGGGAAAG AGCGCACCCT ACAGGCATTT ATAAACAAGA ATGACCTGAT TACTATTAGT
TTTGCCAATC CGCAATATAT GTACTTTATG GGGCAGTGCT TTAAGGATGG GGCGGGCCTA
AATGAAATAC CGAGCCTTCT CAAATCGTTT GTGGCGATTG ACGATCTAGC GCTAGCGATC
TCTGAAAAGG GTGATTACAA ACCCGCCAGG AAAAAATTTG ACGCAAATTC CGTTTTCGGA
ATTATCGAAA AGCATTTCAG CAAGAATGAC TACGTTTTCT GTGACGATCT AGGTGATGAA
TGGGCAGATC ACATCGCCTT CAACAAAAAA GAGCACTCAG TAAGTTTTAT TCACTCCAAG
CACGGAGATG TCAGTAAGTC TGCTAGCAAT CTGCATGATG TTGTAGGTCA AGCGATAAAA
AATATCGGAA ACATGGACCT AGACTTGCGC ACATTCATTC GAAAGTACGA CGAAAAGATT
CTAACAAACT ACCGCGACGG CACAATGCCG CGGATAAGGA AGAAAATTCC AGGCGACTTT
AAAATCTACC TTACTGAACT TAGACAGGAT TATCGATTCA ACAAGCGCTG CATAATCTGC
TGCTCGTTTC TATCAAAGGC ACTTATTGAG AGCGAGTTTG GTAAATTGCA CAGAGGAGTG
CGAGTGCCTG GAAATATAAC CCAGATGTTT TGGATTCTTT CATCTTTTGT GCATGCAACA
AAAGAAGCAG GAGCTTCACC TATTATCTAT TGTCGGCCAT AA
 
Protein sequence
MPWTESHMPE RLTLTQNAQF YREDVALTNE AIRNILDAAS DNKTLGSVFL IDQIDAVREL 
EDGSQFRFSL RVFPTARPVH FWGEPLSDLI HALILIIQID GYVAVLKKSC ASVTEVLERY
LTPIKSSELT ASFSDEEAEF QKIAMRNMTV SERAMRSKAY EAADLKGLLS LHAAGRSIPY
FFKLKLNGQV KTISAQSGRV VESSERKSLN DVVKWVRLQI EQIKNPSGEK EFLEAFAQMV
ELDIVWDATQ PTAALIESSF IVDNLLEKDV PLIYTTKRGR SFELTGKQIS ALIHQLEKVY
EVNPAPGFEL NGTSRSASLK KNKNSISLSS PALRKIKLEE NGKERTLQAF INKNDLITIS
FANPQYMYFM GQCFKDGAGL NEIPSLLKSF VAIDDLALAI SEKGDYKPAR KKFDANSVFG
IIEKHFSKND YVFCDDLGDE WADHIAFNKK EHSVSFIHSK HGDVSKSASN LHDVVGQAIK
NIGNMDLDLR TFIRKYDEKI LTNYRDGTMP RIRKKIPGDF KIYLTELRQD YRFNKRCIIC
CSFLSKALIE SEFGKLHRGV RVPGNITQMF WILSSFVHAT KEAGASPIIY CRP