Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_3431 |
Symbol | |
ID | 5105903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 3787388 |
End bp | 3789169 |
Gene Length | 1782 bp |
Protein Length | 593 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640504687 |
Product | hypothetical protein |
Protein accession | YP_001188915 |
Protein GI | 146308450 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATGGA CGGAGTCTCA CATGCCCGAG CGGTTAACCC TGACCCAGAA TGCTCAGTTT TATCGTGAAG ATGTGGCGCT GACAAACGAA GCCATTCGTA ATATTTTGGA TGCGGCTTCT GATAACAAAA CGCTTGGTTC TGTTTTTCTT ATCGACCAGA TAGACGCAGT ACGTGAGCTT GAGGACGGCA GTCAATTTCG GTTCAGTCTG AGAGTATTCC CAACCGCGAG ACCTGTCCAC TTCTGGGGCG AGCCTCTATC AGACTTAATC CATGCGCTCA TTTTGATCAT CCAGATTGAC GGCTATGTGG CGGTACTGAA GAAGTCCTGC GCAAGCGTTA CCGAGGTTCT AGAAAGATAC CTCACCCCCA TCAAGAGTTC AGAGTTAACG GCTTCATTCA GCGATGAAGA AGCTGAGTTT CAAAAAATCG CGATGCGGAA CATGACTGTT TCGGAACGAG CAATGCGCAG TAAGGCTTAC GAGGCAGCAG ATCTGAAAGG TCTGCTTTCC TTACACGCTG CGGGAAGGTC AATTCCCTAC TTTTTCAAAC TTAAGCTCAA TGGGCAAGTT AAAACTATCT CGGCACAAAG TGGCCGAGTA GTGGAGTCCT CCGAGCGAAA ATCACTTAAC GACGTCGTGA AGTGGGTTCG CCTGCAAATT GAGCAGATCA AAAATCCTTC TGGTGAAAAA GAATTCTTAG AAGCATTCGC ACAGATGGTT GAGCTAGATA TCGTATGGGA TGCCACGCAA CCTACTGCCG CATTAATTGA GTCATCTTTC ATCGTTGATA ATTTGCTAGA GAAGGATGTG CCGTTAATCT ATACGACAAA AAGAGGTCGA TCTTTCGAGC TGACAGGAAA GCAAATTAGC GCATTAATTC ACCAACTTGA AAAGGTATAC GAAGTTAACC CAGCACCGGG CTTTGAACTA AATGGCACGA GCAGGTCGGC CAGCCTTAAG AAAAATAAAA ATTCAATTTC CTTGAGTTCC CCAGCTTTAC GGAAGATCAA GCTTGAGGAA AATGGGAAAG AGCGCACCCT ACAGGCATTT ATAAACAAGA ATGACCTGAT TACTATTAGT TTTGCCAATC CGCAATATAT GTACTTTATG GGGCAGTGCT TTAAGGATGG GGCGGGCCTA AATGAAATAC CGAGCCTTCT CAAATCGTTT GTGGCGATTG ACGATCTAGC GCTAGCGATC TCTGAAAAGG GTGATTACAA ACCCGCCAGG AAAAAATTTG ACGCAAATTC CGTTTTCGGA ATTATCGAAA AGCATTTCAG CAAGAATGAC TACGTTTTCT GTGACGATCT AGGTGATGAA TGGGCAGATC ACATCGCCTT CAACAAAAAA GAGCACTCAG TAAGTTTTAT TCACTCCAAG CACGGAGATG TCAGTAAGTC TGCTAGCAAT CTGCATGATG TTGTAGGTCA AGCGATAAAA AATATCGGAA ACATGGACCT AGACTTGCGC ACATTCATTC GAAAGTACGA CGAAAAGATT CTAACAAACT ACCGCGACGG CACAATGCCG CGGATAAGGA AGAAAATTCC AGGCGACTTT AAAATCTACC TTACTGAACT TAGACAGGAT TATCGATTCA ACAAGCGCTG CATAATCTGC TGCTCGTTTC TATCAAAGGC ACTTATTGAG AGCGAGTTTG GTAAATTGCA CAGAGGAGTG CGAGTGCCTG GAAATATAAC CCAGATGTTT TGGATTCTTT CATCTTTTGT GCATGCAACA AAAGAAGCAG GAGCTTCACC TATTATCTAT TGTCGGCCAT AA
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Protein sequence | MPWTESHMPE RLTLTQNAQF YREDVALTNE AIRNILDAAS DNKTLGSVFL IDQIDAVREL EDGSQFRFSL RVFPTARPVH FWGEPLSDLI HALILIIQID GYVAVLKKSC ASVTEVLERY LTPIKSSELT ASFSDEEAEF QKIAMRNMTV SERAMRSKAY EAADLKGLLS LHAAGRSIPY FFKLKLNGQV KTISAQSGRV VESSERKSLN DVVKWVRLQI EQIKNPSGEK EFLEAFAQMV ELDIVWDATQ PTAALIESSF IVDNLLEKDV PLIYTTKRGR SFELTGKQIS ALIHQLEKVY EVNPAPGFEL NGTSRSASLK KNKNSISLSS PALRKIKLEE NGKERTLQAF INKNDLITIS FANPQYMYFM GQCFKDGAGL NEIPSLLKSF VAIDDLALAI SEKGDYKPAR KKFDANSVFG IIEKHFSKND YVFCDDLGDE WADHIAFNKK EHSVSFIHSK HGDVSKSASN LHDVVGQAIK NIGNMDLDLR TFIRKYDEKI LTNYRDGTMP RIRKKIPGDF KIYLTELRQD YRFNKRCIIC CSFLSKALIE SEFGKLHRGV RVPGNITQMF WILSSFVHAT KEAGASPIIY CRP
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