| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3430 |
|---|
| Symbol | |
|---|
| ID | 5105902 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 3786564 |
|---|
| End bp | 3787217 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640504686 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001188914 |
|---|
| Protein GI | 146308449 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.143988 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCCTCT CCATCGCCCA GAAACGTGTA TATGTACTTA TAGCCAGCCT GGGCAAATGG
TCAGTACGAT CAGGCAGAAC AGCTAGTCGG GAAAAGAATA TGGGGCTCAA AGAAGATCAG
GAATTTTCCC GCGCGGCCTG TGAGCGCTTA ATCATGGGGT TTCCAGCAAA GCTCCTCAAG
AAAGAGTCCG CAATCGCAGA TCGCCTCAGC CAGGTGAAAC TATCGCCCTT GAAGAAGCTG
GAGGCCGTCT ACGAGCTTCT TGGTGAGATA GGTGCACACA TAGCGCCTTC AACGCCCTGC
AAGAAAGGTT GCTCATCCTG CTGCCACTAC GGGGTCAATG TTTCTGAGGT TGAAGTTCAG
TACATAGAGG CACGCACAAA GCACAAACGA TTGAAGCAGA TGCTGCCTAA TGAAAACTTC
CATGGGCAAG CGTGTCCTTT CCTTAAGGAA AACTCCTGCA GTATCTATTT AGCTAGGCCA
TTCGTTTGTC GCCGGCATCA TTCACTGGCA CCGACTCCTG AATGGTGTGC TCCCGATAAG
TCAGCTGCAG GTGATTTTGC TCGGCTTGAA TCCAGCGAGC TGAAAAAAGC TTTTGACGCC
CTACGTGTAG GCAGTCCAGT TTGGGATATC CGACAAGTTT TCAGGGCCCA ATGA
|
|---|
| Protein sequence | MRLSIAQKRV YVLIASLGKW SVRSGRTASR EKNMGLKEDQ EFSRAACERL IMGFPAKLLK
KESAIADRLS QVKLSPLKKL EAVYELLGEI GAHIAPSTPC KKGCSSCCHY GVNVSEVEVQ
YIEARTKHKR LKQMLPNENF HGQACPFLKE NSCSIYLARP FVCRRHHSLA PTPEWCAPDK
SAAGDFARLE SSELKKAFDA LRVGSPVWDI RQVFRAQ
|
|---|
| |