Gene Pmen_3407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3407 
Symbol 
ID5105879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3762479 
End bp3762679 
Gene Length201 bp 
Protein Length66 aa 
Translation table11 
GC content65% 
IMG OID640504663 
Producthypothetical protein 
Protein accessionYP_001188891 
Protein GI146308426 
COG category[R] General function prediction only 
COG ID[COG3313] Predicted Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.29096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.480404 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGATG TGGAAAAGCC GGTGCGTTCG CCCTGCGTCC ACGTTTGTGC GCTGGACGAG 
CAGGACATCT GCATCGGGTG TCAGCGCACG GCCGACGAAA TCACCCGCTG GGGCCGCATG
GACAATGCCG AGCGTCGCGC GGTACTGCAG TTCTGCCTGG AGCGCGCCCG TGCTTGCGGC
CATCTGCTGA CGCCTTCCTG A
 
Protein sequence
MSDVEKPVRS PCVHVCALDE QDICIGCQRT ADEITRWGRM DNAERRAVLQ FCLERARACG 
HLLTPS