| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3397 |
|---|
| Symbol | |
|---|
| ID | 5105869 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 3754091 |
|---|
| End bp | 3754771 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640504653 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001188881 |
|---|
| Protein GI | 146308416 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGC ACAACCACTC ACGCCTCGGC CAGATCCTGA TCAGCAAGGG CCTGATCACC
TCCGCACAGC TGGACGCCGC GATCAAAGTC CAGCTGATCA GCCGCAAGCG CCTGGGCGAA
GTGCTGCTGG AGCAGGGCCT GCTGACCGAG AAACAACTGA GCAGGGCGCT GAAGAAACAG
AGCAACCTGC GCCTGGCCGC CACTCTGGTC GCCGCCCTGA TGAGCCCATT CCAGATGGCC
AGCGCCGACA TCCAGCGCCT GCAGCCGCCC AGCAGCGTCA GCCGGAACGA GACGCCACGC
GGCATGCAGT CGCTCAGCGA CAGCGAAATG AGCTCGGTCA GCGCCCAGGG TCTGGATGAC
GCTTTGCAAG GCTTACTGCT GCGCGCAGAA AATGGCGACG GCCTGGGTAC GGTCAAGCAA
CTGGCCAAGC TGGTGATGCC AGTACTGGAC AACCTGGACG CCGAAACCGG CCTGCGCGAC
GTGCGCTATG ACACCGGCAA GCTGCGCTCT ACGCTGAACG CCGACGGCTC GTTCAACGTC
AACCTGCCCA GCTCCATCGG CGAACTGCGC TTCGACAACA TTCGCGTCAA GGACGCGCCG
CCCGGCCAGA GCTTCGGCAG CCTGAGCCTG CACAACATCG ATCTGTCGCA GGCCAGCCTG
AAAGTCAGCC TGCGCCCCTG A
|
|---|
| Protein sequence | MTQHNHSRLG QILISKGLIT SAQLDAAIKV QLISRKRLGE VLLEQGLLTE KQLSRALKKQ
SNLRLAATLV AALMSPFQMA SADIQRLQPP SSVSRNETPR GMQSLSDSEM SSVSAQGLDD
ALQGLLLRAE NGDGLGTVKQ LAKLVMPVLD NLDAETGLRD VRYDTGKLRS TLNADGSFNV
NLPSSIGELR FDNIRVKDAP PGQSFGSLSL HNIDLSQASL KVSLRP
|
|---|
| |