| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3391 |
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| Symbol | |
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| ID | 5105863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3747638 |
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| End bp | 3748837 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640504647 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001188875 |
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| Protein GI | 146308410 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.592416 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCC CCAGCCAACC TCTTGCCGGC CTGAAAGTGA TCGAACTCGG CAGCCTGATC
GCAGGGCCGT TCGCCGCGCG CATCTGCGCC GAGTTCGGCG CCGAGGTGAT CAAGGTCGAG
TCCCCCGATG GCGGCGACCC GCTGCGCAAG TGGCGCAAGC TGTACGAAGG CACTTCGCTG
TGGTGGTTCG TGCAGGCACG CAACAAACGC TCGATCACCC TCAACCTCAA GCACGAGGCC
GGCCGCGACG TGCTGCGCAA GCTGCTGGCG GAGGCCGACA TCCTGATCGA GAACTTTCGC
CCCGGCGTGC TGGAAAAGCT TGGCCTGGGC TGGGACGCCC TCCATGCACT GAACCCCAGG
CTGGTGATGG TGCGCCTGTC CGGCTTCGGC CAGAGCGGCC CGATGAAGGA TCAGCCGGGG
TTCGGCGCAG TCGGCGAATC CATGGGCGGG CTGCGCTACA TCACCGGTTT CGAGGATCGC
CCGCCAGTGC GCACCGGCAT CAGCATCGGC GACTCCATCG CCGCGCTATG GGGCGTGATC
GGCGCGCTGA TGGCGCTGCG CCAACGCGAA GTCAACGGCG GCAGCGGCCA GGTGGTGGAC
GTGGCGCTGT ACGAGGCGGT GTTCGCCATG ATGGAGTCGA TGGTGCCGGA GTTCGACGTG
TTCGGCTTTA TCCGCGAGCG CAGTGGCAAC ATCATGCCGG GCATCACCCC CTCCTCCATC
CACACCACGG CAGACAACAA GCACATCCAG ATTGGCGCCA ACGGCGACGC CATCTTCAGG
CGCTTCATGC TGGCCATCGG GCGCGAGGAT CTGGCGAACG ATCCCGACCT AGCCAACAAC
GATGGCCGTG ACGCACGACG CGGCGAACTG TACGAGGTGA TCGACCGCTG GGCCGCCAGC
CTGCCCCTGA GCGAGGTGGA AGCGACGCTC AGACGCGCCG AGGTACCGGC CAGTCGCATC
TACTCGGCCG AAGACATGCT CAAGGATCCG CAGTTTCTCG CCCGCGAGAT GTTTCTTTCC
GCGCAACTTC CGGACGGCAA GGCGTTCAAG ATGCCAGGCA TAGTGCCCAA GCTTTCCGAC
ACCCCCGGCG CGGTGCACTG GACGGGGCCG GCGCTGGGCG AACACAACGC CGAGGTGTTG
AGCAGCCTCG GCTATGACGC CCAGCAGATT GAAGAGCTGC GCAACCAGGG AGCGATCTGA
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| Protein sequence | MSAPSQPLAG LKVIELGSLI AGPFAARICA EFGAEVIKVE SPDGGDPLRK WRKLYEGTSL
WWFVQARNKR SITLNLKHEA GRDVLRKLLA EADILIENFR PGVLEKLGLG WDALHALNPR
LVMVRLSGFG QSGPMKDQPG FGAVGESMGG LRYITGFEDR PPVRTGISIG DSIAALWGVI
GALMALRQRE VNGGSGQVVD VALYEAVFAM MESMVPEFDV FGFIRERSGN IMPGITPSSI
HTTADNKHIQ IGANGDAIFR RFMLAIGRED LANDPDLANN DGRDARRGEL YEVIDRWAAS
LPLSEVEATL RRAEVPASRI YSAEDMLKDP QFLAREMFLS AQLPDGKAFK MPGIVPKLSD
TPGAVHWTGP ALGEHNAEVL SSLGYDAQQI EELRNQGAI
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