| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3381 |
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| Symbol | |
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| ID | 5105853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3731910 |
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| End bp | 3733136 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640504637 |
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| Product | manganese transporter NRAMP |
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| Protein accession | YP_001188865 |
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| Protein GI | 146308400 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.764333 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCCA CCCAGCCCCT TGCCGGCCAT ACGCCGGGCA GCCAACGCAA CGTCCTTCGC
GGCGCCATAT TCATCATGGC CACCTCGTCC ATCGGCCCGG CCTTTCTGAC CCAGACATCG
CTGTTCACCG AGAAGTACCT GGCCAGCTTC GCCTTCGCCA TCCTCATCTC GCTGCTGATC
GATATCGGCG CCCAGCTCAA TATCTGGCGG GTGATCACCG TCGCCAACCT GCGCGGCCAG
GATGTCGCCA ACCGCGTGCT GCCGGGTGTC GGCCATCTGA TCTCGGCCTT CATCGTGCTC
GGCGGCATCG CCTTCAACAT CGGCAACATC GGCGGCGCCG GCCTGGCCAT GAACGTGATC
TTCGGCATAC CGCCGATTCT CGGCTCGCTG ATCGCCGCCG TGCTGATCAT CGCCATCTTC
ATGCTGCGCA ACGCCAAGCG GATCATGGAC GGGCTGATGC AGCTGTTCGG TCTGGTGATG
CTGTGCATGA TCGGCTACGC CATGCTGCAG TCCAATCCGC CGCTGCAGGA CGTGCTGCTG
CGCAGCATTC AGCCGGACGA CCCGCTGATC CTGCTGCTGC CGATCGTCAC CCTGGTCGGC
GGTACCGTCG GTGGCTACAT CTCCTTCTCC GGCGGCCATC GCCTGGTCGA GGCCGGCATC
ACCGGCGTGG AGAACGTCGG TGTGGTCACC CGCGCCGCCG TCACCGGCAT CCTGACCACC
GGCGTGGTGC GCATCTGCCT GTTCCTCGCC GCGCTGGGCG TGGTCAGCCA GGGCCTGACG
CTGGACCCGA GCAACCCGGC GGCATCGGTG TTCGCCCACG CCATGGGCAC GGTCGGCTAC
AAGGTGTTCG GCGTGGTGCT GCTGGCGGCG TCGCTGTCCT CGGTGATCGG CGCCGCCTAT
ACCAGCGTCA GCTTCATGTA TTCACTGCAC CCGAGCATCC GCACGCACAA TCAGCGCGTG
GTGATCGCCT TCATCGCCTG CTCCACGCTG ATCTACAGCC TGGTCGGGCA GCCGGTGAAG
GTGCTGGTGG TGGCGGGCGC GCTCAATGCC CTGGTGCTGC CGCTGGCGCT GGGCTGCATC
CTGTGGGCCG CGAAGAAGCC GAGCATCGTC GGCAACGACT ACCGCCACCC GGACTGGATG
CTGGCCTTCG GCGTACTGGC CATCGTCGCC ACGGCGGTGG GCGTGGGCCT GTCGTTCAAC
GCGCTGCTGC AGTTCTGGCA ATCCTGA
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| Protein sequence | MQPTQPLAGH TPGSQRNVLR GAIFIMATSS IGPAFLTQTS LFTEKYLASF AFAILISLLI
DIGAQLNIWR VITVANLRGQ DVANRVLPGV GHLISAFIVL GGIAFNIGNI GGAGLAMNVI
FGIPPILGSL IAAVLIIAIF MLRNAKRIMD GLMQLFGLVM LCMIGYAMLQ SNPPLQDVLL
RSIQPDDPLI LLLPIVTLVG GTVGGYISFS GGHRLVEAGI TGVENVGVVT RAAVTGILTT
GVVRICLFLA ALGVVSQGLT LDPSNPAASV FAHAMGTVGY KVFGVVLLAA SLSSVIGAAY
TSVSFMYSLH PSIRTHNQRV VIAFIACSTL IYSLVGQPVK VLVVAGALNA LVLPLALGCI
LWAAKKPSIV GNDYRHPDWM LAFGVLAIVA TAVGVGLSFN ALLQFWQS
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