| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3380 |
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| Symbol | |
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| ID | 5105852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3730864 |
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| End bp | 3731778 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640504636 |
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| Product | urea amidolyase related protein |
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| Protein accession | YP_001188864 |
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| Protein GI | 146308399 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1984] Allophanate hydrolase subunit 2 |
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| TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.709139 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTTC TGGTGGAACG CAGCGGCGCC CTCGCCAGCC TGCAGGACGG CGGTCGCTTC
GGCGTGCGCC ACCTCGGTGT GACCCAGGGC GGCAGCGCCG ACTGGTGCTC GCACTACTGG
GCCAACTGGT TGCTGGGCAA CCCGCTGACG GCGCCGGTGA TCGAAATCGT TCTGGGCAAC
TTCGAGCTGC TCGCCGAGCA TGACGGCTAT CTCGCCCTGA CCGGGGCCGA CCTCGGCGCC
AGCCTCGACG GTCAGGCGCT GGCGCCGGGC TGCAGCTTCC CCATCGCCAA GGGGCAGCGT
CTGCGCTTCG CCCAGCCGCG CCGGGGGGTA CGTGCCTATC TGGCGGCACC TGGCGGTTTT
CGTGCCCCGG CCACGCTCGG CAGCTGCGCC ACGGTGGCGC GCGAAGCGCT CGGCGGCCTG
CAGGGCGACG GCCGCCCCCT GGCGGTGGGT GATCGTCTGC ACGGGCAACG GGCCGAGCCA
CACATCCGCC GCACCGCGCC GATCCCGGAG ACAGGCGGCA ACGTCGAGCT GACCGTGGTG
CTGGGCGCGC AGATCGGCGA TTTCAGCGGA CAGAGCCTGT TCGATGCCTT CAACCGCGAA
TGGCAGGTCG ACCAGCGCGC CGACCGCATG GGCATCCGTC TGTGCGGCCC GGTACTGCAG
TGCGCACGCC AGTCGATGGT CTCCGAAGGT GTGCCGCTGG GCTCCATCCA GGTACCCAGC
GATGGCCAGC CCATCGTGCT GCTCAACGAC CGTCAGACCA TCGGCGGCTA CCCGCGCCTC
GGCGCGCTCA CCCCACTGGC CGTGGCGCGT CTGGCGCAGT GCCTGCCGGG CGACCGGGTA
CGCCTGCGCC CTGTCGCTCT GGAAGCGGCG CAGCGCCGGC AACGCGAACT GCTCGCACAG
TGGCAGACGC CCTGA
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| Protein sequence | MSLLVERSGA LASLQDGGRF GVRHLGVTQG GSADWCSHYW ANWLLGNPLT APVIEIVLGN
FELLAEHDGY LALTGADLGA SLDGQALAPG CSFPIAKGQR LRFAQPRRGV RAYLAAPGGF
RAPATLGSCA TVAREALGGL QGDGRPLAVG DRLHGQRAEP HIRRTAPIPE TGGNVELTVV
LGAQIGDFSG QSLFDAFNRE WQVDQRADRM GIRLCGPVLQ CARQSMVSEG VPLGSIQVPS
DGQPIVLLND RQTIGGYPRL GALTPLAVAR LAQCLPGDRV RLRPVALEAA QRRQRELLAQ
WQTP
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