| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3378 |
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| Symbol | |
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| ID | 5105850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 3729417 |
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| End bp | 3730166 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640504634 |
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| Product | LamB/YcsF family protein |
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| Protein accession | YP_001188862 |
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| Protein GI | 146308397 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1540] Uncharacterized proteins, homologs of lactam utilization protein B |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.544199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.571628 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCC TGCTCCTGAA CTGCGATATC GGCGAAAGCT ATGGCGCCTG GACCATGGGT
CTGGATGCCG AAGTGATGCC CTTCATCGAC TGCGCCAACA TCGCCTGCGG CTTTCACGCC
TCGGAGCCGC TGACCATGCG CCGCACCGTG GCGCTGGCGG TCGAGCATGG CGTGCGCATC
GGTGCCCACC CCGCCTACCC GGACCTGGCC GGTTTCGGCC GCCGCTCGAT GGCCTGCAGC
CCGGACGAGA TAGAAGCCAT GCTGCTCTAT CAGATCGGCG CGCTCGACGG CATCTGCCGC
GCCCACGGCA CGCGGGTCAG CTACGTCAAG CCGCACGGCG CGCTGTACAA CGACATGATG
CGCGAACCGG CCAAGCTGCG TGCGGTGATG CGCGCCGTTG CCGCCTATGA CCGCGGCCTG
CCGCTGATGC TGATGGCCAC CCGCGACGAC CGGGCGCCGC AGGCGATGGC GGACGAGTTG
GGTCTGCAGC TGTGGTTCGA GGTGTTCGCC GACCGCGCCT ACGACGCCAA TGGCATGCTG
CTGGCGCGCA GCCTGCCCGG CGCGGTGCAC CATGGCGCGG AAACCATCGT CGCCCAGGCA
GTGGCCCTGG CGCGCGGCGA ATCGTTGAGC GCCAGCGACG GCAGCGCCCT CTACCTGCGC
GCCGATACCC TCTGCGTGCA CGGCGACAAC GCCGCCTCGG TGGCGGCGGT GCAGCGTATC
CGCGCCGCCC TGCAGAGCCT GCCGACATGA
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| Protein sequence | MSRLLLNCDI GESYGAWTMG LDAEVMPFID CANIACGFHA SEPLTMRRTV ALAVEHGVRI
GAHPAYPDLA GFGRRSMACS PDEIEAMLLY QIGALDGICR AHGTRVSYVK PHGALYNDMM
REPAKLRAVM RAVAAYDRGL PLMLMATRDD RAPQAMADEL GLQLWFEVFA DRAYDANGML
LARSLPGAVH HGAETIVAQA VALARGESLS ASDGSALYLR ADTLCVHGDN AASVAAVQRI
RAALQSLPT
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