| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_3372 |
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| Symbol | |
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| ID | 5105844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 3721380 |
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| End bp | 3722315 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640504628 |
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| Product | autotransporter beta-domain-containing protein |
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| Protein accession | YP_001188856 |
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| Protein GI | 146308391 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.357676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCTGC GTGTAGCGCT GATCGGGTTG GGCTTGCTGC AGGTCGCTAC CGGCGTCGTA
GCTGGCGACC TGGCGCTGGA CCAGCGCGCC TTGCTCCTAG AGGACAGTCG CTTGCCGCGT
GAGGCGGCCC TGGATCGTCT GCAGCAGGTG CGCTTCGCCT TTCGCGAGGC GGCGCCTGAG
GCCGGCGAGC GGCCGCTGTG GTCGCGTACC TACGGCATCC AGGGGAGCTG GGACGATGCC
GGTCTCGAGC GCCGCGGCGA GGGGCTGCTG ATGGGGATGG ATCGTGCGCT GGGTGGGCAG
TGGATCGGCG GTGTGCTGGG TGGAGTGGCG CGTGCCCGGC TGGATCATGA TCAGGGTCAT
GGCCGCACCG ACAGTCATTA CCTTGGGGTC TACGCCGCGA CGCGGGTATA CAACCAGTTG
GGGTTTCGGC TCGGGGTGCT GCACGGCTGG CATGAGCTGG AACGGCGCGA TGGCGCGCGC
AGTTGGCAGC TGTTTGGCGA AAGCAGTTAC GCCCTGGACT ATCGCGATTT CACCTTGGAG
CCATTTGCCG GCCTGGCGTT CGTGCATCTG GATGCCGACG CCCGGCGTTT CGACGGACTG
CGCCTGGCGG CAGCGCACGA GCAGGCCGGT TACCTGACGC TTGGCTGGCG CCTGGCCGCG
CCCTGGTACT GGCAGCAGCG CAAGTGGGTA GGGCGTGCCA GTCTGGCGCT GCGGCAGAAC
CTGGGCAGCA ACCGCTTGCG TGACGAGGCG ATCGACGGCC AGGGCGCACT CCAGCAGTTG
CACAGTCGTG AGTTCGAGCG CAGCAGCCTG CGTCTCGACC TGAGCCTGGA TCATGAACTC
AGCCGCAGTC TCTACCTGGG CCTGACCTAT GCAGGCCATT ACGCCGAAGA CGCGCGCGAC
AACGCCCTGG CAGCACGCCT GAGTCTGAAG TTCTGA
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| Protein sequence | MALRVALIGL GLLQVATGVV AGDLALDQRA LLLEDSRLPR EAALDRLQQV RFAFREAAPE
AGERPLWSRT YGIQGSWDDA GLERRGEGLL MGMDRALGGQ WIGGVLGGVA RARLDHDQGH
GRTDSHYLGV YAATRVYNQL GFRLGVLHGW HELERRDGAR SWQLFGESSY ALDYRDFTLE
PFAGLAFVHL DADARRFDGL RLAAAHEQAG YLTLGWRLAA PWYWQQRKWV GRASLALRQN
LGSNRLRDEA IDGQGALQQL HSREFERSSL RLDLSLDHEL SRSLYLGLTY AGHYAEDARD
NALAARLSLK F
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