Gene Pmen_3365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3365 
Symbol 
ID5105837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3714031 
End bp3714924 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content68% 
IMG OID640504621 
Productalpha/beta fold family hydrolase-like protein 
Protein accessionYP_001188849 
Protein GI146308384 
COG category[R] General function prediction only 
COG ID[COG1073] Hydrolases of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.432106 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAAGTA AGCTGCGCGC CGTCACGTTG CTGATCGTCA GCCTATGGCT GGGGGGCTGC 
AGCGGCCTGC TGTTCTACCC CGAGCCGGGC TTGCCCTTCA CCCCCGAGCG GGCCGGGCTG
GAGTACCGCG ACATCGACCT GCGGGCCGCC GATGGCACCC GTCTGCATGC CTGGTGGTTG
CCGGTCAAAC CCGGCGTGGA GCTGAAAGGC ACGGTGCTGC ACCTGCATGG CAACGGCGGC
AACCTGGCCT GGCACCTGGG CGGTGCGTAC TGGTTGCCGG AGCAGGGTTA TCAGGTGCTG
ATGCTGGACT ACCGCGGTTA TGGGTTGTCC GAGGGCAAGC CCAGTCTGCC GGCGGTGTAC
CAGGACATCG ATGCCGCCTT CGCTTGGCTC GAGCAGGCCC CCGAGGTGCA GGGCAAACCG
CTGATCCTGC TCGGCCAGAG CCTCGGCGGT GCGCTGGCGG TGCACTACCT GGCGCAGCAC
CCGCAGCGTC GCGAGGCCTT GCAGTCCATG GTGCTCGATG GTGTGCCGGC CAGCTATCGC
AGCGTTGCCC GGCATGCCCT GAGCACCTCC TGGCTGACCT GGCCGCTGCA GGTGCCGCTG
TCCTGGCTGG TGCCGGACAG CGACAGCGCC ATCCACGGCA TCGCCGGGCT CGAGGGGTTG
CCGCTGTTGA TCTATCACAG TGTTGACGAC GCCGTGGTAC CCCTGTCCAA TGGCCGCCGT
TTGTATCAAG CTGCGCGCCC GCCGCGAGCC TTTCAGGCGA CCCGTGGCGG GCACGTGCAA
ACCTTCGCCG AGCCAGCCTG GCGCCAGCTT ATGCTGGAGT TCGTCAGTGC GCCCCTGGCC
TTCGTCCAGC GCCAGGGGGC GGCCAACGAA TCCGCAACCG AGAGTCCGCA ATGA
 
Protein sequence
MASKLRAVTL LIVSLWLGGC SGLLFYPEPG LPFTPERAGL EYRDIDLRAA DGTRLHAWWL 
PVKPGVELKG TVLHLHGNGG NLAWHLGGAY WLPEQGYQVL MLDYRGYGLS EGKPSLPAVY
QDIDAAFAWL EQAPEVQGKP LILLGQSLGG ALAVHYLAQH PQRREALQSM VLDGVPASYR
SVARHALSTS WLTWPLQVPL SWLVPDSDSA IHGIAGLEGL PLLIYHSVDD AVVPLSNGRR
LYQAARPPRA FQATRGGHVQ TFAEPAWRQL MLEFVSAPLA FVQRQGAANE SATESPQ