Gene Pmen_3360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_3360 
Symbol 
ID5105832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp3708806 
End bp3711442 
Gene Length2637 bp 
Protein Length878 aa 
Translation table11 
GC content69% 
IMG OID640504616 
Productphosphoenolpyruvate carboxylase 
Protein accessionYP_001188844 
Protein GI146308379 
COG category[C] Energy production and conversion 
COG ID[COG2352] Phosphoenolpyruvate carboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.620961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAAA TCGATGCGCG CCTGCGAGAG GAAGTCCACC TGCTCGGTGA GCTGCTCGGG 
CAGACCATAC GAACCCAGCT CGGCGACGAC TTTCTCGACA AGATCGAACG CATTCGCAAG
GGCGCCAAGG CCGGCCGCCG CGGCTCGGCG GCCGGAGCCG AACAGCTGAC CAGCACCCTC
GGCGACCTTG GCGACGACGA GTTGTTGCCC GTTGCGCGGG CCTTCAACCA GTTTCTCAAT
CTGGCCAATA TCGCCGAGCA GCAACACCGT GTGCGCCGAC GCCGCCCGGA CGAGCCCGAG
CCCTTCGAGC TGCGGGTACT CGACGAGTTG CTCGAGCGCC TGCTCGCCGC CGGTCAGAAA
CCCGACGAGT TGGCACGTCA GCTCGGCCGC CTGGACATCG AACTGGTGCT GACCGCGCAC
CCCACCGAAG TGGCGCGGCG TACCCTGATC CAGAAATACG ATGCCATCGC CGCGCAGCTG
ACGGCGCTGG ACCACAGCGA CCTGCTGCCG GCCGAGCGTG AGCGCATCGC CCAGCGCCTG
CAGCGGCTGA TCGCCGAGGC CTGGCATACC GAAGAGATTC GACGCAGCCG GCCCAGCCCG
GTGGACGAAG CCAAATGGGG CTTCGCCGTG ATCGAGCACT CGCTGTGGCA GGCCGTGCCG
CAGTTCCTGC GCCGCGCCGA CCGCAGCCTG CAGGCCGCCA CCGGTTTGCG TTTGCCGCTG
GAGGCGGCGC CGATTCGCTT TGCCTCCTGG ATGGGCGGCG ACCGCGACGG CAATCCCAAT
GTCACCGCTC GCGTCACCCG CGAGGTGCTG CTGCTGGCGC GCTGGATGGC CGCCGACCTG
TATTTGCGCG ATGTCGATCA ACTGGCCGCC GAGCTGTCCA TGCAGCAGGC CAGTGCCGAG
CTGCGCGCCC AGGTCGGTGA TAGCGCCGAG CCTTATCGGG CGTTGCTCAA GCAGTTGCGC
GAGCGCCTGC GCGAGACGCG CAGCTGGGCG CAGCAGGCGC TGACGGCCGA CATCGCGCCC
GGCGCTGCGG TGTTGCAGGA CAATCATGAT CTGCTGGCGC CGCTGCAGCT CTGCTATCAG
TCGCTGCACG CCTGCGGCAT GGGCGTGATC GCCGATGGGC CGCTGCTCGA CTGCCTGCGC
CGGGCAGCGA CCTTCGGCCT GTTCCTGGTG CGTCTCGATG TGCGTCAGGA TTCCACCCGG
CACGCCGCCG CGTTGTCGGA GATCACCGAT TACCTGGGCC TCGGGCGTTA CGCCGAGTGG
GACGAGGAGC AGCGCCTGGC CTTCCTGCAG CGCGAACTGG ACAGCCGTCG GCCACTGCTG
CCGAGCGATT ACCGGCCCTC GGCCGATACC GCCGAAGTGC TCGCCACCTG TCGCGAGGTG
GCCGCTGCGC CCGCGGCAGC GCTGGGCTCG TACGTGATCT CCATGGCCGG TGCAGCCTCC
GACGTGCTGG CGGTGCAACT GCTGCTCAAG GAAGCCGGGT TGCGCCGGCC GATGCGCGTG
GTGCCACTGT TCGAAACCCT GGCCGATCTG GACAACGCAG GCCCGGTGAT CGATCGCCTG
CTGGGGTTGC CCGGTTATCG GGTGCGGTTG CACGGGCCGC AGGAAGTGAT GATCGGCTAT
TCCGATTCGG CCAAGGATGC CGGTACCACC GCGGCCGCCT GGGCGCAGTA CCGCGCCCAG
GAGGAGCTGG TGCGCCTGTG TGGCGAACAT CAAGTGGAGC TGCTGCTGTT CCATGGCCGC
GGTGGCACCG TGGGCCGGGG CGGTGGCCCG GCTCATGCCG CGATCCTGTC GCAACCGCCG
GGTTCGGTGG CGGGGCGTTT CCGCACCACC GAGCAGGGCG AGATGATCCG CTTCAAGTTC
GGCCTGCCGG ACATCGCCGA GCAGAACCTC AATCTGTATC TCGCTGCGGT GCTGGAGGCC
ACCTTGCTGC CGCCACCTGC GCCCGAGCCG AGCTGGCGGG CGATGATGGA TCGGCTTGCC
GACGTCGGGG TCAAGGCCTA CCGCGGCGTG GTGCGCGAGC ATCCGCAGTT CGTCGCCTAC
TTCCGCCAGG CGACCCCGGA GCAGGAGCTG GGCAGGCTGC CACTCGGCAG TCGTCCGGCC
AAGCGCCGCG AAGGTGGGGT CGAGAGCCTG CGGGCGATTC CGTGGATCTT CGCCTGGACC
CAGACGCGCC TGATGCTGCC GGCGTGGCTT GGCTGGGAAC AGGCGCTGGG CCAGGCGCTG
GCCGGTGGCG AAGGCGAGCT GCTGAAGAAC ATGCGCGAGC AGTGGCCATT CTTCCGCACG
CGCATCGACA TGCTGGAGAT GGTGCTGGCC AAGGCCGACG CCAGCATTGC AGCACTGTAT
GACCAGCGTC TGGTGGAACC GGCGCTGCAG CCACTGGGTG CGCAGTTACG CGACCTATTG
TCGCAGGCCT GCGCCGCGGT GCTGGAACTG ACCGGTCAGT CGCGCCTGCT CGCGCACAGC
CCGGAGACGC TGGAATCGAT CAGCGTGCGC AACACCTATC TCGATCCGCT GCATCTGCTG
CAGGCCGAGC TGCTGGCACG GTGCCGGCTA CGCCAACAGG CGCCGGAGAG CCCTCTGGAG
CAGGCGCTGC TGGTCAGCGT GGCGGGCATT GCGGCCGGTC TGCGCAACAC CGGTTGA
 
Protein sequence
MAEIDARLRE EVHLLGELLG QTIRTQLGDD FLDKIERIRK GAKAGRRGSA AGAEQLTSTL 
GDLGDDELLP VARAFNQFLN LANIAEQQHR VRRRRPDEPE PFELRVLDEL LERLLAAGQK
PDELARQLGR LDIELVLTAH PTEVARRTLI QKYDAIAAQL TALDHSDLLP AERERIAQRL
QRLIAEAWHT EEIRRSRPSP VDEAKWGFAV IEHSLWQAVP QFLRRADRSL QAATGLRLPL
EAAPIRFASW MGGDRDGNPN VTARVTREVL LLARWMAADL YLRDVDQLAA ELSMQQASAE
LRAQVGDSAE PYRALLKQLR ERLRETRSWA QQALTADIAP GAAVLQDNHD LLAPLQLCYQ
SLHACGMGVI ADGPLLDCLR RAATFGLFLV RLDVRQDSTR HAAALSEITD YLGLGRYAEW
DEEQRLAFLQ RELDSRRPLL PSDYRPSADT AEVLATCREV AAAPAAALGS YVISMAGAAS
DVLAVQLLLK EAGLRRPMRV VPLFETLADL DNAGPVIDRL LGLPGYRVRL HGPQEVMIGY
SDSAKDAGTT AAAWAQYRAQ EELVRLCGEH QVELLLFHGR GGTVGRGGGP AHAAILSQPP
GSVAGRFRTT EQGEMIRFKF GLPDIAEQNL NLYLAAVLEA TLLPPPAPEP SWRAMMDRLA
DVGVKAYRGV VREHPQFVAY FRQATPEQEL GRLPLGSRPA KRREGGVESL RAIPWIFAWT
QTRLMLPAWL GWEQALGQAL AGGEGELLKN MREQWPFFRT RIDMLEMVLA KADASIAALY
DQRLVEPALQ PLGAQLRDLL SQACAAVLEL TGQSRLLAHS PETLESISVR NTYLDPLHLL
QAELLARCRL RQQAPESPLE QALLVSVAGI AAGLRNTG